Halohasta litchfieldiae: halTADL_3163
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Entry
halTADL_3163 CDS
T05239
Name
(GenBank) sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hae03000
]
halTADL_3163
Transcription factors [BR:
hae03000
]
Prokaryotic type
Helix-turn-helix
Other families
halTADL_3163
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
DUF2250
MarR_2
E2F_TDP
iSirtuin
GntR
HTH_24
HTH_IclR
PadR
Motif
Other DBs
NCBI-ProteinID:
ATW89865
UniProt:
A0A1H6SW71
LinkDB
All DBs
Position
complement(3057561..3058352)
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AA seq
263 aa
AA seq
DB search
MSTLENVTEAVEVLQQIGLKEYEARCFVGLSRLSTGTAKQLSEMTDVPRTRVYDAVRILE
AQGLVKIQHSSPQKFRAVSMSEATETLRGQYESRVDRLQAALDDVEMVEDHDESSIQQVW
ALTGSTAIESRTNKLLDKATNEIVLVVGDESLLTDRLVDNLTEMNRSVDLLIGAPTELIR
TAIQESIPEATTFVSGLGWLREEEQDTGETAIGRLLLVDRSKILVSTILPSTNEEHAIYG
EGFGNGLVVIARRLMSQGEFTGE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtccacattagaaaacgtaaccgaggctgtcgaagtcctccagcagatcgggctcaag
gagtacgaagcccgctgtttcgtcggcctctcacggctgtctacgggcaccgcaaagcaa
ctcagcgagatgaccgacgtgccgcgaacccgcgtctacgatgcggttcgcatcttagag
gcccaagggttggtcaaaatccagcattcgagtccccagaagttccgggccgtctcgatg
tcggaggcgaccgaaacgcttcgcggtcagtacgaaagtcgcgtcgaccgactccaggct
gcgttggacgatgtggagatggtcgaagaccacgatgaatcgtcgatccagcaggtgtgg
gcactgaccggttcgacggccatcgaaagccggacgaacaaactgctcgacaaagccacc
aacgagatcgtgttggtcgtcggcgacgagtcgctgttgaccgaccggctggtcgacaat
ctcaccgaaatgaaccggagcgtcgacctgctgatcggcgcgccgaccgaactgattcga
actgcgatccaagagtcgatccccgaggcaaccacgttcgtttcggggttagggtggctc
cgagaggaggaacaagataccggtgagacggctatcggtcggctgctgttggtcgaccgc
tcgaagatcctcgtgagtacgatccttccgtcgaccaacgaggaacacgcgatctacggc
gaggggttcggcaacggcctggtcgtgatcgcgcgtcgactgatgtcacagggcgagttc
acaggagaataa
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