Halohasta litchfieldiae: halTADL_3303
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Entry
halTADL_3303 CDS
T05239
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hae
Halohasta litchfieldiae
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hae03016
]
halTADL_3303
Enzymes [BR:
hae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
halTADL_3303
Transfer RNA biogenesis [BR:
hae03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
halTADL_3303
Prokaryotic type
halTADL_3303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
DUF7112
Motif
Other DBs
NCBI-ProteinID:
ATW90005
UniProt:
A0A1H6WM65
LinkDB
All DBs
Position
complement(3184163..3185092)
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AA seq
309 aa
AA seq
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MSLRVTFLGTSGAVPTTDRAPSAIFINREGDGLLFDCGEGTQRQMMRFGTGFDVSHLFVT
HLHGDHILGIPGLVQSWSFNGRDEPLTIYTPQGSGHDIETLLTVGDYTPAFPVEIVEVSA
GDLAHEADEYEVRAFQTHHQTNAVGYALIEDDRPGRFDRQKAEEELGIPPGPAYGRLHAG
ESVELDDGRVVDPAEVVGEPRPGRKVVYTGDTRPVDATVEIAEDADLLIHDGTFAADNTD
RARKTAHSTGGEAGEIAARAGVQRLALTHISSRYGADSSPIKQDAESTFDGEVFVARDGQ
TLDLPFPDE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgtgtgacctttctcggcaccagcggggccgttccgacgaccgaccgggct
ccgagtgccatctttatcaaccgcgagggcgacggactcctgttcgactgtggcgagggc
acacagcgccagatgatgcggttcggtaccgggttcgacgtctctcatctcttcgttacg
catctccacggtgaccacattctcgggattcccggactcgtccagagttggagcttcaac
ggacgggacgagccactgacgatctatacgccacaaggttcgggccacgatatcgagacc
ctgctcacggtcggcgactacacaccggcgtttccggtcgagatcgttgaggtcagtgcc
ggggacctcgcccacgaggccgacgagtacgaagtccgagccttccagacgcaccaccag
accaacgcggtcggctacgcgctgatcgaggacgaccgccccggccggttcgaccgccag
aaagccgaagaagaactgggaattccgccgggaccggcctacggtcgactccacgctggc
gagtcggtcgaactcgacgacggccgcgtggtcgaccccgcggaagtcgtcggcgagcca
cgtcccggccgaaaagtcgtctatacgggtgacacgcgaccggtcgacgcaaccgtcgag
atcgccgaggacgctgacctgttgatccacgatggaacgttcgcggccgacaacaccgac
cgcgcccgcaaaaccgctcactcgaccggcggcgaagccggggagatcgccgcccgcgcc
ggggttcagcgactcgcgttgacgcatatttcctcacggtatggggccgactcctcgccg
atcaagcaggatgccgagtcgacgttcgacggcgaagtgttcgtcgcccgcgatggccag
acgctcgatctgccgtttcccgacgagtag
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