Halohasta litchfieldiae: halTADL_3449
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Entry
halTADL_3449 CDS
T05239
Name
(GenBank) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hae
Halohasta litchfieldiae
Pathway
hae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
halTADL_3449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hae03021
]
halTADL_3449
Transcription machinery [BR:
hae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
halTADL_3449
Prokaryotic type
Archaeal type
TFB
halTADL_3449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
Zn_ribbon_LysW
Zn_Ribbon_YjdM
Zn_ribbon_Elf1
Lar_restr_allev
Sigma70_r4
Zn_ribbon_tTFIIB
Ribosomal_S27e
Zn_ribbon_PaaD
Cyclin_N
Cyclin_C
zf_Tbcl
Motif
Other DBs
NCBI-ProteinID:
ATW90150
UniProt:
A0A1H6XS81
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All DBs
Position
3320220..3321173
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AA seq
317 aa
AA seq
DB search
MERPSRQRQEERESEQQSDETLNCPECGSDEIITDADQGELVCDDCGLVLDEQQIDRGPE
WRAFNHSERQSKSRVGAPITETMHDRGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVATA
ALYAACRQEGIPRSLDEVAEVSRVPQKEIGRTYRYISQELGLELRPVDPKQFVPRFASSL
ELSEEVQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGFR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagcaggcagcgccaagaagagcgagaatcggagcagcagtcggacgaa
accctcaactgtcccgagtgcggctcagacgagatcatcacggatgccgatcagggtgag
ttggtctgtgatgactgtgggttggtgcttgacgagcagcagatcgaccgcggcccggag
tggcgggcgttcaatcactccgaacgacagagcaaatcacgcgtcggcgcgccgatcacc
gagacgatgcacgaccgtgggctgacgacgaccatcgactggaaggacaaagacgcctac
gggcggtcgctgtcctcggaaaagcggagccagatgcaccggctccgcaaatggcaggag
cgaatccgaacaaaggatgcgggcgagcgtaacctgcagttcgcactcagtgagatcgac
cgaatggcctccgcactcggcgtcccgcggtcggtacgggaggtcgcgtcggtcatctat
cgccgggcgctcaacgaggacctcattcgcggtcgctccattgagggcgttgcgaccgcc
gcgctgtacgcggcctgtcgacaggagggcattccacgctccctcgacgaggtcgcggag
gtctcccgagtcccccaaaaggagatcggtcgaacgtatcgctacatttcccaagagttg
ggcctcgaactccggccggtcgaccccaaacagttcgtaccgcggttcgcttcctcgctc
gaactctcggaggaagtacaggccaaagccaccgagatcatcgacgtctcggccgaacag
ggcctgctctcggggaaatcgccaactggctttgctgccgccgcaatttatgcggcctcc
ctgctgtgcaacgagaagaagacccaacgtgaggttgccgacgttgcccaagtcacggag
gtcactatccggaaccgctaccaagaacagatcgaagcgatgggcttccgctaa
DBGET
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