KEGG   Haemophilus aegyptius: NCTC8502_00047
Entry
NCTC8502_00047    CDS       T06550                                 
Symbol
vapC_1
Name
(GenBank) putative nucleic acid-binding protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
haeg  Haemophilus aegyptius
Brite
KEGG Orthology (KO) [BR:haeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:haeg03016]
    NCTC8502_00047 (vapC_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:haeg02048]
    NCTC8502_00047 (vapC_1)
Transfer RNA biogenesis [BR:haeg03016]
 Prokaryotic type
  tRNA degradation factors
   NCTC8502_00047 (vapC_1)
Prokaryotic defense system [BR:haeg02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    NCTC8502_00047 (vapC_1)
SSDB
Motif
Pfam: PIN DUF5615 PIN_3
Other DBs
NCBI-ProteinID: SQH34664
LinkDB
Position
1:47730..48128
AA seq 132 aa
MLKYMLDTNIVIYVIKRRPLEILSRFNQNAGKMCVSSITVAELYYGAEKSEYPERNIAVI
EDFLSRLTILDYQPKHAAHFGNIKAELSKQGKLIGENDIHIAAHARSEGLILVSNNLREF
ERVIALRTENWV
NT seq 399 nt   +upstreamnt  +downstreamnt
gtgttgaaatatatgcttgatactaacattgtgatttacgtgattaagcgtaggccattg
gaaattctttctcgctttaatcaaaatgcaggaaaaatgtgcgtgagtagcattactgtg
gctgaactctattatggagctgaaaaaagcgaatatcccgaaagaaacattgcggttatt
gaagatttcttatcacgcctcaccattttagattaccaaccaaagcatgcagctcatttc
ggcaatattaaagctgaactctctaaacaagggaaattgattggcgaaaatgatattcat
atagctgctcatgctcgtagtgaagggttaattctggttagtaacaatttaagagaattt
gagcgagttatagcattacgtacagaaaattgggtgtaa

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