Haemophilus aegyptius: NCTC8502_00110
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Entry
NCTC8502_00110 CDS
T06550
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC8502_00110 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haeg03019
]
NCTC8502_00110 (rhlB)
Enzymes [BR:
haeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC8502_00110 (rhlB)
Messenger RNA biogenesis [BR:
haeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC8502_00110 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
SQH34796
LinkDB
All DBs
Position
1:complement(112442..113689)
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AA seq
415 aa
AA seq
DB search
MQQDYLSQQRFSALPLHPIVRDALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTATFHHLLTHQDPNLKYPHPRALILVPTRELAVQISNDAEFLAKASGLKTALAYGG
DGYDKQLQAIECGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPAPQARLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVPPQGHTRHRSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacaacgattctccgcgcttcctctacacccgattgta
cgagatgctttggcaaaaaaaggctttgatttttgtaccccaattcaggctttatccttg
cctatcagtttaaatggacgagatgttgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacggctacttttcaccatcttttaacccaccaagatcctaatcttaaa
tatcctcacccaagagctttgattttagtgcctactcgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagcgagtggattaaagaccgcacttgcctatggtggc
gatggttatgataaacaactacaagcgattgagtgtggcgtagatattttgattggtacg
acggggcgagtcattgattatgtgaaacaaggcgtaattggtttagatgaaatccaagtt
gtcgtgctagatgaagcagatcgaatgtttgatcttgggtttatccgtgatattcgttat
ttattgcgtaaatgccccgctccgcaagctcgtttaacgatgttattttcagcgacgctt
tcttataaagtgcgtgaattagcatttgaagatatgaatgaccctgaatatattgaaatt
gaacctgaacaaaaaacaggtcatcgcattaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgaatggcctgaacgctgtattgta
tttgcgaatacgaaacatcgttgtgaagaaatttggggctatttggcggctgatgggcat
cgtgtcggtttactgactggcgatgtagcacagaaaaaacgtttatcgttattaaaacaa
tttactgatggtgatttggatattttagtggcaacagatgtggctgctcgtggcttgcat
atttctgatgtgacgcatgttttcaattatgatttacccgatgatcgagaagattatgtt
caccgaatcggccgcactggacgagcaggggaaagtggtgtttcgattagttttgcttgc
gaagaatatgcgatgaatttaccagcaattgaagaatatattggccattctatccctgtg
agccaatatgaaacagaagccttgcttgaactgccgaaaccgtatcggttgaaacgtgcg
gtgccaccgcaaggacatacaagacatcgttcttatcacacaaaatag
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