Haemophilus aegyptius: NCTC8502_00718
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Entry
NCTC8502_00718 CDS
T06550
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
haeg
Haemophilus aegyptius
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haeg03009
]
NCTC8502_00718 (srmB)
Enzymes [BR:
haeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC8502_00718 (srmB)
Ribosome biogenesis [BR:
haeg03009
]
Prokaryotic type
rRNA helicases
NCTC8502_00718 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
SQH36201
LinkDB
All DBs
Position
1:673811..675145
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AA seq
444 aa
AA seq
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MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLL
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARILASLEPRTKPPKDGEVKSVSKKQKARIKEKREDKKKTEAKKKVKL
RHKDTKNIGKRRKPSNSHIYACIV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcccaatttgaacaattcgatctttctccagagcttttaaaggcacttgag
aaaaaaggttattcccgcccaacagctattcaaatggaagccattcctgccgcaatggaa
gagcgtgatgtattaggctctgctccaacgggaacagggaaaacggctgcttttttatta
cctgcgctacaacatttattggattatccacgccgtaaaccaggcccaccgcgtattttg
gtattaacaccaacccgagaactggcaatgcaagtggctgaacaagcggaagaattagcg
cagttcacccatttaaatattgcgacaattacaggtggcgtggcgtatcaaaatcacggt
gatgtattcaataccaatcaagatttggtggtggctacgccaggccgtttattgcagtac
attaaggaagaaaattttgattgccgttccgttgaaatgctgatttttgacgaagccgat
agaatgttacaaatgggatttgggcaagatgcggaaaaaattgcagctgaaacccgttgg
cgaaaacaaactttgttgttttctgcaaccttagaaggagagttattggtcgattttgcg
gagcgtttgttgaatgatcctgtgaaagtagatgcggaaccaagtcgccgtgaaagaaaa
aaaatcaatcaatggtattatcacgcagacagcaatgaacacaaaatcaaattgctcgcg
cgttttattgaaactgaagaagtaacccgtggaattgtgtttgttcgccgtcgtgaagat
gcgcgtgaactttccgaaacattgcgtaaacgaggcattcgttccgcatatttagaaggc
gaaatggcacaaactcaacgtaacaatgccattgataaattgaaatcaggtattgtgacg
gtattggttgcaacggatgtggctgcgcgtggtattgatattgatgatgtaagccatgta
atgaattttgatttgccctatagtgcggatacttatttacatcgaattggacgtaccgcg
cgagctggcaaaaaaggcacggcagtctcttttgtcgaagcccatgactacaagttgcta
ggtaaaatcaaacgctatactgaggaaattttaaaggcgcgcattttagcaagtttagag
cctcgcactaagccaccaaaagatggcgaagtgaaatctgtcagcaaaaaacaaaaggct
cgtattaaagaaaaacgtgaagataagaaaaaaacagaggcaaagaaaaaagtaaaattg
cgtcataaggatacaaaaaatatcggcaaacgacgcaagccaagtaacagtcatatttat
gcttgtatagtatag
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