Haemophilus aegyptius: NCTC8502_00977
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Entry
NCTC8502_00977 CDS
T06550
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
KO
K03701
excinuclease ABC subunit A
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC8502_00977 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haeg03400
]
NCTC8502_00977 (uvrA)
DNA repair and recombination proteins [BR:
haeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC8502_00977 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC8502_00977 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_21
RsgA_GTPase
nSTAND3
AAA_23
AAA_25
DnaJ_CXXCXGXG
Viral_helicase1
NACHT
cobW
Motif
Other DBs
NCBI-ProteinID:
SQH36747
UniProt:
A0ABY1VTK9
LinkDB
All DBs
Position
1:894159..896990
Genome browser
AA seq
943 aa
AA seq
DB search
MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PDHDVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHVKILENIAAQGYIRARID
GEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVADMNNP
KTEELIFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI
SLAGGAVKGWDRRNFYYYQILTSLAKHYHFDVEAPYESLPKKIQHIIMQGSGKEEIEFQY
MNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCTDCGGSRLRPEARN
VYIGKTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI
PKKRTALDKKKWLKLKGASGNNLRNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN
ALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGQIIATGTPEQVAKVESSHTARFLKPILEKP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatcgatattcgcggggctagaacccataacctgaaaaatattaatttaact
attccacgcaataaacttgtggtgattactgggctttcaggttcgggaaaatcctcttta
gcctttgatacactttatgcggaagggcaacgccgctatgttgaatctctttcggcgtat
gcgcgtcaatttttgtctttaatggaaaagcctgatgtggattctattgagggactttcc
cctgcaatttcgattgaacaaaaatctacctcacacaatccacgttctacagtgggaaca
attacggaaatttacgattatttacgtttattgtttgcacgagtaggggagccgcgttgt
ccagatcatgatgttccattaactgcacaaacaattagtcaaatggtggataaagtatta
agtttgccagaagacagcaagatgatgttacttgcgccagttgtcaaaaatcgaaaaggc
gaacacgttaagattttagaaaatattgctgcgcaaggttatattcgtgcgcgtattgat
ggcgagatttgcgatttatctgatccgccaaaattagccttacagaaaaaacatactatt
gaagtagtggttgatcgttttaaagtgcggtcagatttagcaacacgtttagcagagtct
tttgaaaccgcattagagctttcaggtggcactgcgattgtggcagatatgaataatccg
aaaacggaagaattaattttttcagcaaattttgcttgtccgcattgtggttattctgtg
ccagaattagagcctcgtttattttcctttaacaatcctgcaggtgcttgcccaacttgt
gatggcttgggtgtgcagcaatattttgatgaagatcgtgtggtgcaaaatccaactatt
tctcttgctggtggtgcggtaaaaggttgggatcgtcgtaatttctattattatcaaata
cttacatcattggcgaaacattatcattttgatgttgaagccccttatgaatctttgcca
aagaagattcaacatatcattatgcagggttcaggaaaagaggaaattgaattccaatat
atgaatgatcgtggcgatgtggttattcgcaagcacccttttgaagggattttgaataat
atggctcgccgatataaagaaacggaatcaatgtcggtgcgtgaagaattagcgaaaaat
attagcaatcgaccttgtacagattgtggcggttctcgtttgcgacccgaagcgcgtaat
gtgtatattggaaaaaccaatttgccgataattgcggaaaaaagcattggcgaaaccctc
gaattttttaccgcactttctctcactggtcaaaaagcacaaattgcggaaaaaattctt
aaagaaatccgcgagcgtttgcagtttttagtcaatgttggtttgaattatctttctctt
tctcgttctgctgaaactctttcaggtggggaggcgcaacgtattcgccttgcgagtcaa
attggtgcgggacttgttggcgtaatgtatgtattagatgaaccctctattggcttgcac
caacgtgataatgaacgcttacttaatacgttaattcatttgcgtaatcttggtaatacg
gtaattgtcgtggagcacgatgaagacgcgattcgtgcagctgaccatattattgatatt
ggacctggtgctggcgtgcatggcggacaagttattgcgcaaggaaatgccgatgaaatt
atgctcaatccaaattccatcacgggaaaatttttatcgggcgcagataaaatcgaaatc
ccgaaaaaacgcaccgcacttgataagaaaaaatggctcaaacttaaaggtgcatcaggt
aataacttaagaaatgtgaatttagatattcccgttggtttgtttacttgcgtgacaggt
gtgtctggttcaggaaaatccacacttattaatgacaccttatttccacttgcgcaaaat
gcgttaaatagagcggaaaagacggattacgcaccttatcaatctatcgagggattagaa
catttcgataaagttattgatattaaccaaagcccgattgggcgcacgccacgttcaaat
ccagccacttatacaggcttatttaccccaattcgcgagctttttgcaggggtgccagag
gcacgtgcgcgcggttataatccaggacgttttagctttaacgtacgaggtggacgctgt
gaggcttgtcaaggagatggtgtactcaaagttgaaatgcactttttgcccgatgtttat
gttccttgcgaccaatgtaaaggcaaacgctataatcgcgaaaccttagaaattcgttat
aaaggcaaaaccatccatcaagttttggacatgacggtggaagaggcgcgcgagtttttt
gatgcgattccaatgattgcaagaaaattacaaaccttgatagatgtgggattatcttat
attcgattaggtcaatcttccacaacactttcaggcggcgaagcacaacgcgtgaaacta
gcaacggaactttctaaacgtgatacgggtaaaactttgtatattctagatgaaccgacg
actggtttgcattttgctgatattaagcaattacttgaagtactgcatcgattacgcgac
caaggaaatactatagtcgtcattgaacacaatcttgatgtgattaaaaccgcagactgg
attgtcgatcttggtccagagggaggcagtggcggcggacaaattattgcgacgggtaca
ccagagcaagttgccaaagtagaaagttcccacaccgctcgcttccttaaaccgatttta
gaaaaaccttag
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