Haemophilus aegyptius: NCTC8502_01314
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Entry
NCTC8502_01314 CDS
T06550
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03420
Nucleotide excision repair
haeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC8502_01314 (uvrD)
03430 Mismatch repair
NCTC8502_01314 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haeg03400
]
NCTC8502_01314 (uvrD)
Enzymes [BR:
haeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC8502_01314 (uvrD)
DNA repair and recombination proteins [BR:
haeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC8502_01314 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC8502_01314 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF4391
PhoH
Motif
Other DBs
NCBI-ProteinID:
SQH37548
LinkDB
All DBs
Position
1:complement(1235112..1237295)
Genome browser
AA seq
727 aa
AA seq
DB search
MMDISELLDGLNDKQREAVAAPLGNRLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMA
VTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILD
SEDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQ
IYQDTCDRAGLVDFAELLIRVYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKI
LAGKTGKVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETILLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRS
NSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTR
GIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMP
LFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLT
HASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAQKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNL
AKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSENNTRLQIAFQAQGIKWLIAHL
AKLEKVR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatttctgaattacttgacggactcaacgataaacaacgcgaagccgtagct
gctcctcttggtaatcgcctagtgctagctggtgcaggatcgggcaaaacgcgtgtattg
acgcaccgtattgcttggttaattgcggtcgaaaatatttctgaaggcagcattatggcg
gtgacgtttaccaataaagccgcagcagaaatgcgtcatcgtattcaatctacccttgcc
aaacacgcacaacatcaattatttggtatgtggattggcaccttccatagcattgctcat
cgtttgttgcgagctcatcatttagatgtgggattgccacaagatttccaaattttagat
tcagaagatcaacttcgtttaattaaacgattattaaaattacataattttgatgaaaaa
gcttttccgcctaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcga
ccaaatgatattgaagattttaatgatcgccaagaacgtgaatggattaaaatttatcag
atctatcaagacacttgcgatcgcgcagggttggtcgattttgctgaattattaattcgg
gtctatgaattatttgagaaaaaaccattaattttgcaacgttatcaacaacgttttcag
catattttggtggatgaatttcaagacaccaataaaatccaatataaatggatcaaaatt
cttgctggaaaaacaggcaaagtcatgatcgtaggcgatgatgatcaatctatatacggt
tggcgtggtgcgcaaattgaaaatatccaaaaattcttgaaagatttcaaagccgagaca
attctccttgaacaaaactatcgttctaccgccaatatcctaaacagcgcaaatgaatta
attgcaaacaatagtgatcgtcttggtaaaaatttatggacagagggtgaaaaaggcgat
cctgtgggcatctattctgcctttaatgaattagatgaagcaaaatttgtcgcttcacaa
attcaggattgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagt
aatagccaatcacgggttattgaagaagccttaattcgttgtcaaattccatatcgtatt
tatggcggtatgcgtttcttcgaacgtcaagaaattaaagatgcgttagcctatcttcgt
ttgattaataatcgtcaagatgatgcggcttttgagcgtgtaattaatacgccaacccgt
ggcattggcgaccgcactttagatatattgcgtaacttaacacgtgaacgccaaattacc
ttatggcaagcagtacaagtcgcaacacaagaaaatatgttggcagggcgagcctccaca
gccttattacgtttccaagaattaattaattcattacaacttgataccgcagaaatgccg
cttttcgcacaaactgattttgtgattaaacattcgggcttatatgaaatgtatcaacaa
gaaaaaggcgaaaaaggcgaagtgcgtattgaaaatttggaagaattagttaccgcaacc
cgtgaatttatcaaacctgataatgcggaagaaatgaccgaactcactgcctttttaacg
cacgcttccttagaagctggcgaagaacaagcctcgccgcatcaatcttgtgtagaaatg
atgacgttgcactctgcgaaaggcttagaatttcctcgtgtatttatggtgggcgtagaa
gaaggattattcccaagttttcgttcttttgaagaacccggacgtttagaagaagagcgt
cgtttagcttatgtcggtattactcgcgcacagaaaaaactgaccatctcttatgcggaa
agccgtcgattatatgccaaagaagaacgccatttgccatcacggtttatcgcagaatta
ccgagagaatgtatccaagaaattcgtttacgagggacagtcacgcgtgcgatgaaccta
gcaaaagtcggttcattgtcgaataccagtgcggtcgaaaatgaatggaaaatgggtcaa
aaagttaaacacgaaaaatttggtttcggcacagtgattaatgtggaaggatctgaaaat
aacacacgtttacaaatagcattccaagcgcaaggcattaaatggttgattgcgcatttg
gcaaaattggaaaaagtgcggtag
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