Haemophilus aegyptius: NCTC8502_01602
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Entry
NCTC8502_01602 CDS
T06550
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC8502_01602 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haeg03400
]
NCTC8502_01602 (sbcB)
Enzymes [BR:
haeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
NCTC8502_01602 (sbcB)
DNA repair and recombination proteins [BR:
haeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC8502_01602 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC8502_01602 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC8502_01602 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
SQH37896
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All DBs
Position
1:1498076..1499497
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AA seq
473 aa
AA seq
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MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAV
MVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAM
ADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDN
VETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRA
EQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatttcagcttttttatttacgattatgaaagttttggtgtaaatccagca
acagatcgtcctgcgcaatttgcgggtattcgtacagatgctgattttaatatcattggc
gaaccaataatgttttattgtaaacaaaccaacgattatttaccagctcctgaagccgta
atggtcacaggaattacgcctcaagaatgtaatgaaaaggggctttcagagcctgaattc
gccgcaaatatcttagcagaattttcccaacccaatacttgtgtcatgggttataacaat
attcgctatgatgatgaaatgacgcgttatacgttttatcgtaattttattgatccttat
gaatacagctggaaaaatgggaattcacgctgggatttgttagatttagtgcgagcctgt
tatgccttgcgtccagaaggaattaattgggcttatgacgatgatggaatgccaagtttc
cgcttagaaaaactcactaaagcaaatggtattgagcatgaaaatgctcacgatgccatg
gcggatgtatatgcaactattgctatggcgaaattaattaaagaaaaacagcctaaatta
ttccaatatttctttgaaaatcgcggtaaaaaagaaatcgaaaaattagttgatacaggc
gcaatgacacctttagtgcatgtttctggaatgctagggaattatcgtggaaattgcact
tgggttgcacctttagcttggcatccgacaaatcaaaatgcactcattgtttgtgattta
actggcgatatcgataatttattagccaaaagtgcggatgaattacggacagatttatat
accaaaaaatctaaattagaagaaagaggagtttcatctgttccgttaaagcttgtgcat
atcaataaatgtcctattttagcaccagctaaaactttgttaccagaaacagcaaatcga
ttgggtattgatcgacaattatgcttggataatcttgcaaaattacgagcatcttttgat
attcgtgaaaaagtggcggatatttttaatgaagaacgtcaatttgcatcgaatgataat
gtagaaactgagttatacaatggcttttttagcaatgctgataaaaataatatggctatt
ttacgtagtttacctgcagaaaaattatctgaacatggtttagcttttgaagataaacgt
atccttgaattattattccattatcgcgctcgtcatttttataaaaccctcacacgcgct
gaacaaattaaatggaaaaaataccgacagaataaacttgaaaaaagtgcggtagagttt
gaatcaagtttacaacgtttagctgaggaacattcagataattctgaaaaactatctttg
ctacaacaagtatatgaatatggtataaaattactaggttag
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