Haemophilus aegyptius: NCTC8502_01687
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Entry
NCTC8502_01687 CDS
T06550
Symbol
recD
Name
(GenBank) exonuclease V (RecBCD complex), alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC8502_01687 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haeg03400
]
NCTC8502_01687 (recD)
Enzymes [BR:
haeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC8502_01687 (recD)
DNA repair and recombination proteins [BR:
haeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC8502_01687 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
ResIII
AAA_28
AAA_16
NTPase_1
DEAD
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
SQH37979
LinkDB
All DBs
Position
1:complement(1572459..1574381)
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AA seq
640 aa
AA seq
DB search
MLSVLHKLKELRILSQGDYYFAKLIADKQCHTDYAEPIKNLAILLAALCSWRYTQGNTCS
QLDRYLEHNLFGLAYRTTEEDYLAEIREKIGYLAVEDWQNALRGHIAFTQDPVNQIAPMA
FQFGALYFYRAWQDEYRIAQYIKNTLKKHRTLAFSYDEIHQKLDKYFPEKQEKTDWQKVA
VATAIKSPFSIITGGPGTGKTTTVTRLLLVLQELFDCKLHIKLVAPTGKAASRLEESIKN
ALGFMQEKMNVSDSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETSMI
DLPMMAKLINALKPETRLILLGDQAQLASVEAGAVLGELAQFVTQPYSHEQATYLQATTG
YKVEGSDCSNPIRDCLCHLTESRRFDKDSGIGKLAEFIQKGKADDSLELFDHYPQELHFN
ALNDESDAVNQVVKSAVENYRTFLKMLDDLRKQKIDPNAKNEQGISYAEAIQVQFNSVRF
LTALRNNNLGVENLNKEIALALREEKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGL
CLANGKVWFGNREVLTSRIPAHEPAFMMTIHKSQGSEFKHTVMVLPTEVNPVLSRELVFT
GVTRAKKELTVFADEKIWKTAIRQTVKRQSGLGKLLEDLN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgtattacacaaacttaaagagctgcgcattctttctcaaggtgattattat
tttgctaagttgatagctgataaacaatgtcatacggattatgcggaaccaatcaaaaat
ttagctatattattagccgcactttgtagctggcgttatacacagggaaatacttgcagc
caattagatcgctatttagaacataatttatttggtttggcttatcgtacaacggaagaa
gattatttagcagaaattcgtgaaaagattggttatttagctgtggaagattggcaaaat
gcgttgcgcgggcatattgcatttacgcaagatcctgtcaatcaaattgcgccaatggca
tttcaatttggcgcgttgtatttctatcgagcttggcaagatgaatatcgcatcgcacaa
tatataaaaaacaccttaaaaaaacaccgcactttagccttttcttatgatgaaattcat
caaaaattagataaatatttccctgaaaaacaggaaaaaacagattggcaaaaagtggca
gtggcgacagcgattaaaagtccattttcgattattacaggcggcccaggaacaggaaaa
accaccacagttacgcgtttattgctcgttctacaagaattatttgattgtaaattacac
atcaaattggttgcgccgactggcaaagccgcctcccgtttggaagagtcgattaaaaat
gcgttaggttttatgcaagaaaaaatgaatgtatccgattcacttttcaatgcgattcca
caaaaagccagcaccttgcatagtttactgggcgtgaacgcctttaatgattacacgcgc
tataacagccataaccctttgcaattagatgtgttagttgtcgatgaaacatcaatgatt
gatttgccgatgatggcaaaacttatcaatgcgttaaagcccgaaacccgattaatttta
ttaggcgatcaagcgcaattagcctctgttgaggcgggggcagtattgggagaattagct
caatttgttactcaaccttatagtcatgaacaagccacgtatttacaagcgacaacaggt
tacaaagtagaaggttccgattgttcaaatccaatacgtgattgcttatgccatctaaca
gaaagtcgccgttttgataaagattcaggcattggcaagttggctgaattcattcaaaaa
ggcaaagcagacgatagccttgagttatttgaccattatccgcaagaattgcactttaat
gccctaaatgatgaaagcgatgcggtcaatcaagtggtgaaaagtgcggtggaaaattac
cgcactttcttaaaaatgttggatgatttacgtaaacaaaaaattgatcctaacgctaaa
aatgaacaaggcatttcctatgccgaagctattcaagtgcaatttaattctgtgagattt
ttaaccgcacttcgtaataacaatttaggtgtcgaaaatctcaataaagaaattgcgtta
gcgttgcgagaggaaaaattgctttggttccgtaatgaacaagattggtatatcggcaag
ccaattatgattactgaaaacgatcataatgttcgcctttataacggcgatattggactg
tgcttggcaaatggcaaagtatggtttggcaatcgagaagtgctgacaagccgaattcca
gcgcatgagcccgcttttatgatgacgattcataaatctcaaggttcagaatttaaacat
accgtcatggtgcttccaacagaagtaaatccagtactgtcgcgagaattagttttcacg
ggcgtcactcgtgcgaaaaaagaactcactgtatttgccgatgaaaaaatatggaaaaca
gcgattcgccagaccgtcaaacgccagagcggattgggaaaattattggaagatttaaat
tag
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