Haemophilus aegyptius: NCTC8502_01688
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Entry
NCTC8502_01688 CDS
T06550
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
haeg
Haemophilus aegyptius
Pathway
haeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC8502_01688 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haeg03400
]
NCTC8502_01688 (recB)
Enzymes [BR:
haeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC8502_01688 (recB)
DNA repair and recombination proteins [BR:
haeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC8502_01688 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
AAA_12
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SQH37980
LinkDB
All DBs
Position
1:complement(1574381..1578016)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSRPLNVEEILVV
TFTEMATEELKKKIRERITDAIDKLTAFAKTQDKSAFKNDEFLTALCDNLDIFEAIHRLK
LAEQNMDLAAIYTIHGFCRRMLMQYAFHSGIHFNLELIKDQSDLLVRFANEFWREHFYPL
DFESANFIATELVSPENVLSLLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALN
ELKAFWLESADEISAIITNELEKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKPATPFYSPIFAELEKRVNALMTPDLLSKLT
LYHYRQGLQQKLLDYKLNHQEKSFDDLLRLFCEALQGAQGDELAEMIRFQYPFAMIDEFQ
DTDSQQYAIFSKIYRDNPEKNTGFIMIGDPKQAIYRFRGADIFTYLKASDEAQSRFELTK
NYRSEKHLVDGVNALFDFPQSPFIYQNINFTAVDSRDDHLRFYLNGKAEPAYRFYLTESD
KVNKTEMAKICAISIQHWLKSAAENQAVFQNEDTCKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFGLNAADIHQIQ
QNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISERLLSQATGERDLTDFLHLAE
ILQQAATIHESEAALLSWFEKQIQGEGRQEAQIRLESERQLVKIVTIHKSKGLEYDLVWL
PFLAAPSKDPSKKDINIYYSKERDETLWDIENRNLNALCEETFAEELRLFYVALTRAKYQ
MAFALPAQFDKKWNALHYVLSQGEIGKEINLSDSKDTETLLQAFKEKMRDNVEICTKPNL
EALPTLSINTKNDDFKAAEFTGNIEQDWRITSFTSIEQAHRRQNYFTESAGKKHAVFDDA
KDYDSQNSIEMSTVLLNESESSILDLPRGKQVGTALHRHFENCYFSDLANIEEIDKLRQS
LQLDETFTESLQNWLQQISHTPLSNEIGIALADLANKDCIKEMPFYLAIREHFDVEAFNH
TLKVHHHLPSEPLQFEQIQGMVRGSIDLVFRHNGKYYLVDYKSNFLGSTLADYNQEALKK
EMLHSHYDWQYLIYTLALNRYLQSVVPHYDYARDFGGVFYLFLRGMNGEPQSGIFYDRPR
VELITELDGVF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacaatcccactgaatcccatcacgttgcctttaaatcaaattagcttaatc
gaagcgtccgctggtacagggaaaacctacactattggttctttatacctccgactttta
ttaaaggcgggagaaaataacttttctcgtccgttaaatgtggaagaaattctggtggta
acctttacggaaatggcaacagaagaactcaagaaaaaaattcgtgagcgtataacagat
gcgattgataaactcactgcctttgctaaaacccaagataaatccgcatttaaaaatgat
gaatttcttaccgcactttgtgataatttagatatttttgaggcaattcatcgcttgaaa
ttagccgagcaaaatatggatttggcggcgatttataccattcacggtttttgtcgccgt
atgttgatgcaatatgctttccattcaggcattcacttcaatttagaattaataaaagat
caatctgatttgttagttcgttttgctaatgaattttggcgagagcatttttatccgtta
gattttgaatctgcgaattttatcgcgacagaattagtatcgccagaaaatgtgttgtct
ttgttgaaagcggatttaggtaaagatttgcaggtggagattgaaaataaacaggcgtta
tctgtaccaatacaaatctttttaccgcaatatcttggtggttatcaaaaggcgttgaat
gaattaaaggcattttggttagaaagtgcggatgaaatttcagcgattattaccaatgaa
ctggagaaagattatccaaaagatcagttgaaatcgttaaatcgtaaaaagtaccaagta
aagcgtttaggggattggattaataaaatcaatcaatggtcaaataatcctagagattat
caaattaataccacattgaaagactatttcctacaatcatctattgagaaaaattgcgaa
gaatcaacggataaaaataaagataaaaaacccgcaacgcctttttattccccgattttt
gcagagcttgaaaagcgcgttaatgccttaatgacaccagatttactaagcaaactcact
ctttatcattatcgacaaggcttacaacaaaaacttttagactataaacttaatcaccaa
gaaaaatcctttgatgatttattgcgcttgttttgcgaagctctgcaaggtgcgcaagga
gatgaattagcggaaatgattcgcttccaatatccttttgcgatgattgatgagtttcag
gatacagattcacaacaatacgctattttttcaaaaatttatcgtgataatcccgaaaaa
aatactggttttattatgattggtgatccgaagcaggcgatttatcgtttccgtggtgca
gatatttttacttatctaaaagcatcggacgaagcccaatctcgctttgaactcactaaa
aattatcgttcagagaagcatttggttgatggcgtaaatgcgttgtttgattttcctcaa
tcgccatttatttatcaaaatattaactttactgctgttgattctcgtgatgatcatctg
cgattttatttgaacggtaaagccgaaccagcttatcgtttttatctaactgaaagtgac
aaagtgaataaaactgaaatggcaaaaatatgtgcgatttctattcaacattggctaaaa
agtgcggcagaaaatcaggcagtttttcaaaatgaagatacctgtaaaacattgcaagcg
gcgaatattgccgtattagtgcgtgataaaaatgaagcggctttagtaaaaaatgaattg
caaaaattggggatcgcgtcagtttatctttctgatcaaaatagcgtatttgatagcaat
gttgcgaaagaattagcttgggtgcttaaagcctgtttgaatgtggcagaacgtccaatt
ttgaacgcaattgcgaccgcactttttggcttaaatgcagcggatattcatcaaattcag
cagaatgaggcagactggcaacgttgggctgatagctttgctcaataccaacaaacctgg
caacgccaaggaatattggcaatgttacatcaaattttattggagcaaggcatttcagaa
cgcttattaagccaagccacgggcgagcgagatttaacggatttcctacatttggcagaa
attttacaacaagctgccacgatacacgaaagtgaagcggcattgctcagttggtttgaa
aaacaaattcaaggcgaagggcgtcaagaggctcaaattcgtttagaaagtgaacgccag
ttggtaaaaattgtgacaatccataaatctaaaggcttagaatatgatttagtttggcta
ccatttttagctgcgccgagcaaagatccaagtaaaaaagacatcaatatttattattct
aaagaacgagatgaaaccttatgggatatagaaaatcgcaatttaaacgctctttgtgaa
gaaacttttgcggaagagttacgtttattttatgtggctttaacgcgtgccaaatatcaa
atggcattcgctttgcctgcgcaatttgataaaaaatggaatgccttgcattatgtacta
agccaaggtgaaataggcaaggaaataaatttgtcggattctaaagataccgagacgttg
ttgcaagcctttaaagaaaaaatgcgagataatgtggaaatctgtactaagccaaatcta
gaggctttgccgaccttatcaattaatacaaaaaatgatgattttaaagccgcagaattt
acgggcaatattgagcaagattggcgaataaccagttttacttcaattgaacaagcacat
cgccgacaaaattatttcactgaaagtgcgggtaaaaaacacgctgtttttgatgacgca
aaagattatgacagccaaaattcgattgaaatgtccaccgtacttttaaacgaaagcgaa
tcaagcattttagatttgccaagaggtaaacaagtcgggacagcattgcatcgccatttt
gaaaattgctatttttctgatttagcaaatatagaagaaattgacaaattaagacaatcc
ttacagttagatgaaacttttacagagtcgctacaaaattggctacaacagatttcacat
acaccactttctaatgaaataggaatagcattagctgatttggcaaataaagattgcatt
aaagaaatgccattttatctggctattcgggaacattttgatgttgaagcgtttaatcac
acgttgaaagtccatcatcatttgccaagcgagccacttcaatttgaacaaattcagggc
atggtgcgaggttcgattgacttagttttccgccataatggaaagtattatcttgttgat
tataaatctaatttcttaggttcaacccttgctgattacaatcaagaggcattgaaaaaa
gaaatgttacacagtcactatgattggcaatatttaatttatacgctggcattaaatcgt
tatttacaaagcgtcgtgcctcattacgattatgcgcgagatttcggtggggtattttat
cttttcttacgtggaatgaacggtgagccacaatctggcatattttacgatcgtccaagg
gttgaattaatcacagaattagacggggtgttttaa
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