Haemophilus aegyptius: NCTC8502_01914
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Entry
NCTC8502_01914 CDS
T06550
Symbol
rnb
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
haeg
Haemophilus aegyptius
Brite
KEGG Orthology (KO) [BR:
haeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haeg03016
]
NCTC8502_01914 (rnb)
Enzymes [BR:
haeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NCTC8502_01914 (rnb)
Transfer RNA biogenesis [BR:
haeg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC8502_01914 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
TRAM
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
SQH38199
LinkDB
All DBs
Position
1:complement(1825584..1827563)
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AA seq
659 aa
AA seq
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MFQDNPLLAQLKQQIHDSKEQVEGVVKSTDKVYGFLECDKKTYFIAPPSMKKVMHGDKIK
ATIEKQGDKEQAEPESLIEPMLTRFIAKVRFNKDKKLQVLVDHPNINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICQADDELAPWWVTLARHEQSRYPVQGTEP
YEMLDQKTRENLTALHFVTIDSESTMDMDDALYIEPIAQNSTQTGWKLVVAIADPTAYIA
LDSQIEQEAKQRCFTNYLPGFNIPMLPRELSDELCSLIANETRPALVCYIETDLAGNITA
KPHFVSAYVQSKAKLAYNKVSDYLEQADNAWQPETPETAQQIHWLHQFTKARIQWRKTHS
LLFKEKPDYAFVLAENGKVQEIKAEYRRIANQIVEEAMIIANICAAQFLHEQAKTGIFNT
HSGFDKKYLENAHHFLMANLANEQNQTELAERYSVENLATLNGYCQMRNDIDPLESDYLE
LRLRRYLTFTEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQPYEKPQN
DVLARLQEARRQNRLVERDIADWLYCRYLAPKVAENVEFNAEVQDVMRAGLRVQLLENSA
SLFIPAATLHNNKEEIQLNPDELALYIKGERTYKIGDIVKVKLTEVKEATRSIVGEILQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatcctctactcgcacaacttaaacaacaaatccacgacagcaaagaa
caggttgagggcgtggtaaaaagcacagataaggtctacggttttttagagtgcgataag
aaaacctatttcatcgcaccgccatcaatgaaaaaagtgatgcacggcgacaaaatcaaa
gccactattgaaaaacagggcgacaaagaacaagccgagccagaatccttaattgagcca
atgctcacacgttttatcgcaaaagtgcggttcaataaagacaagaaattacaagttttg
gtggatcacccaaacattaatcagcccattggtgcacaacaggcgaaatctgttaaagaa
gaactgcaagagggcgactgggtcgtcgcaaatttaaaaacccatccattacgtgacgat
cgctttttctacgccacaattaatcaatttatttgccaagctgatgatgaattagcccct
tggtgggtcacattggcacgccacgaacaatcgcgctatcccgtgcaaggcacagaacct
tatgaaatgttagatcaaaaaacacgcgaaaatctgaccgcacttcattttgtaaccatt
gattccgaaagcacaatggatatggacgatgccttatatatcgaacccatagcacaaaac
agcacacaaacaggctggaaattagtggtcgctattgctgacccaaccgcttacatcgcc
ttagattctcaaattgaacaagaagccaaacagcgttgcttcacaaattatttaccgggc
tttaacattccaatgttacctcgtgaattatctgatgaattatgttccttaatcgccaat
gaaacccgccctgcgcttgtctgttatatcgaaaccgatcttgcaggcaacatcacagcc
aaaccgcattttgtttccgcttatgttcaatctaaagccaaattggcttacaacaaagtg
tcggattatttagaacaggcagacaatgcatggcagccagaaacgccagaaacagcacaa
caaattcactggctacatcaatttaccaaagcccgcattcaatggcgcaaaacccattcc
ttactctttaaagaaaaacccgattatgcctttgtgctggcagaaaacggcaaagtgcaa
gaaatcaaagcagaatatcgccgcattgccaatcaaattgtggaagaagcaatgattatt
gccaacatctgcgccgcccaatttttacacgaacaggcaaaaacaggcattttcaacacc
cacagcggttttgataaaaaatacttagaaaatgcgcaccatttcttaatggcaaattta
gccaatgaacaaaatcaaactgaactggcagaacgttattcagtagaaaacttagcaacc
ttaaacggctattgccaaatgcgcaacgacatagaccccctcgaaagcgattatttagaa
ctgcgtttacgccgttatttaactttcaccgaatttaaatcagaattagcaccgcacttt
ggtcttggtttagaaggctatgccacttggacatcgcccatccgcaaatattcagatatg
gttaatcatcgcttaatcaaagccgtgctggcaaaacagccttatgaaaaaccacaaaat
gacgtgttggcacgtttgcaagaggctcgccgccaaaatcgcctagtggaacgtgatatt
gccgattggctatattgccgttatcttgcgccgaaagtggctgaaaatgtggaatttaat
gcagaagtgcaagatgtaatgcgtgcaggcttacgcgtacaactgctcgaaaatagtgca
tcgctatttattcctgccgccacgttgcacaacaacaaagaagaaatacagctaaaccct
gacgaactcgccctctatataaaaggcgaacgcacttacaaaataggcgacattgtgaaa
gtgaaactcacagaagtgaaagaagcaactcgcagtattgtgggcgaaatacttcaataa
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