Hymenobacter aerilatus: MUN82_02490
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Entry
MUN82_02490 CDS
T09397
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
haei
Hymenobacter aerilatus
Brite
KEGG Orthology (KO) [BR:
haei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haei03016
]
MUN82_02490
Enzymes [BR:
haei01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUN82_02490
Transfer RNA biogenesis [BR:
haei03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUN82_02490
Prokaryotic type
tRNA splicing ligases
MUN82_02490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UOR05981
UniProt:
A0A8T9SX69
LinkDB
All DBs
Position
complement(593973..595406)
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AA seq
477 aa
AA seq
DB search
MAKPTKLHGSDLRKLGYPEGNAINLALDILEDRQLSKLDKGSALALLRKIKEDPYAYLRD
SLWRELAKEFVPDPSRKVGLNPEIKDYRRYGEAFIEDGARKQMDTAMQLPITLDGALMPD
AHQGYGLPIGGVLAVDNAVIPYGVGMDIGCRMALSVFALPPRYLEQRTQELKKLLHANTR
FGGKEVFKNPTDDPILDRPEFKEIAVVRGKRDAAISQLGSSGSGNHFVEWGVVDITTEDN
ELNLPVGHYMGLLSHSGSRGLGAAIAQHYTKVAMSKCPLPPEARYLAWLDLDSQEGQEYW
RAMNLAGDYASACHRDIHRRLSQALGEKPLAKVENHHNFAWKETLADGREAIVHRKGATP
AGAGVLGIIPGSMTAPGFIVRGRGEQGSIQSASHGAGRKMSRTQAKQQLSEGNVRRYLRD
HGIELIGGGLDEAPMAYKDIHQVMAHQRDLVDVLGSFTPRIVRMDAGGGGKSKYGGE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacccaccaagctacacggcagcgacctgcgcaaactaggctacccggaaggc
aacgccatcaacttggcgctggacattctggaagatcggcagctcagcaagctggacaaa
ggcagcgccttggcgttgctgcgcaagattaaggaagacccctacgcctacctgcgcgac
tcgctgtggcgggagctggccaaggagtttgtgcccgatcccagccgcaaggtgggcctg
aaccccgagataaaagactaccgccgctacggcgaagccttcattgaggatggcgcccgc
aagcagatggatacggccatgcagctgcccatcaccctagacggtgccctcatgcccgac
gcgcaccagggctacggcctacccattgggggcgtgttagccgtcgataacgccgtcatt
ccctacggggtaggcatggacattgggtgccgcatggccctgtcggtgtttgcgttgcca
ccgcgctaccttgagcagcgcacccaggagctgaaaaagctgctgcacgcgaacacccgt
ttcggtgggaaggaagtgttcaaaaaccccaccgatgaccccattctggatcggcccgag
ttcaaggaaattgccgtggtgcggggcaagcgcgacgcggcaattagtcagttgggctcc
tcgggctccggcaaccacttcgtggaatggggcgtggtggatatcaccaccgaagacaac
gagctgaacctgcccgttggacactacatgggcttgctctcgcacagcggctcacgggga
ttaggagcagccattgcccagcactacaccaaggtagccatgagcaagtgccctctaccc
ccggaagcgcgctacctcgcctggctcgacctcgacagccaggaaggacaagaatattgg
cgggccatgaacctggccggcgactacgcctcagcctgccaccgcgatattcaccgtcgt
ctgagccaggccttgggcgaaaagcccctggcaaaagtggaaaaccaccacaactttgcc
tggaaagaaaccttagccgatggccgcgaggccattgtgcaccgcaagggcgccacgccg
gccggcgcaggcgtgctgggcatcattccagggtctatgacggcacccggctttattgtg
cggggtagaggcgagcagggttccattcagtcggcgtcgcacggagcagggcgtaagatg
tcgcgcacgcaggccaagcagcagctctcggagggcaacgtgcgccgctacctgcgcgac
cacggcatcgagctgattggcggcgggctggatgaggcacccatggcgtataaagacatt
caccaagtgatggcgcaccagcgtgacctggttgatgtgctgggctcctttacaccccgc
atcgtacgcatggacgcaggcggcggtggcaaaagcaagtacggcggcgagtag
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