Hymenobacter aerilatus: MUN82_04600
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Entry
MUN82_04600 CDS
T09397
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
haei
Hymenobacter aerilatus
Brite
KEGG Orthology (KO) [BR:
haei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haei03016
]
MUN82_04600
Enzymes [BR:
haei01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUN82_04600
Transfer RNA biogenesis [BR:
haei03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUN82_04600
Prokaryotic type
tRNA splicing ligases
MUN82_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UOR06378
UniProt:
A0A8T9SWC2
LinkDB
All DBs
Position
1078174..1079577
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AA seq
467 aa
AA seq
DB search
MAQQLRGNDLRQLGFPEGRAIGLALAQLQRKHLKKLSHTEQLMLLQNLLANPNDYLTHLD
WSHTAAALLPPPSRHIALAERKPYALFGAEYIDQSAIHQMETAMKLPVTVAGALMPDAHH
GYGLPIGGVLATDNAVIPYAVGVDIGCRMALSVFALPPKHLEQRVQELRKMLVDNTRFGN
RDVFRHGQKLDHAVLDRAEFQEIGFLRNKLDTAATQIGSSGGGNHFVEWGVVDILDPTNE
LGVPVGQYLGLLSHSGSRGLGASIANHYTKLAKDVCQLPSEAQHLAWLSLESEAGQEYWA
AMNLAGDYASACHHQIHQRLAKALGERPLAKVENHHNFAWKERLATGQEVVVHRKGATPA
GAGVLGIIPGSMTAPGFIVRGRGEATSLASASHGAGRAMSRTRAKQELGEADVRRYLQQH
HIELIGGGVDEAPQAYKDIHAVMASQHDLVDVLGTFTPRIVRMEGGV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaactacgcggcaacgaccttcgccaactgggtttcccggaaggtcgggcc
attgggctggcgctggcacaattgcagcgcaagcacctcaaaaaactttcgcataccgag
cagctgatgttgctccaaaatttactcgctaaccccaacgactacctcacccacctcgat
tggagccacacggccgccgccttgctaccaccgccttcgcgccatattgccctagccgag
cgcaagccttacgccttgtttggggctgagtacatcgaccagagtgccattcaccagatg
gaaacggccatgaaactgcccgtgacggtggccggcgccctcatgcccgacgctcaccac
ggctacggcctacccatcgggggcgtgctggctaccgataacgccgtgattccctacgct
gtgggcgtcgacattggctgccgtatggccttgtcagtattcgcgctgccgcccaagcac
ctggagcagcgtgtgcaggagctacgcaaaatgctggtagacaacacccgcttcggtaac
cgcgacgtattccgtcacgggcagaagctggaccacgccgtgctcgaccgcgccgaattc
caggaaatcgggtttctgcgcaataagctggacacggcggccacccaaattggctcatcg
ggtggcggcaaccactttgtggagtggggtgtggtagacattctcgacccgaccaatgag
ttgggcgtgccggtagggcagtatctggggctgttgtcgcactccggctcgcgggggctg
ggtgctagcatcgccaaccactacaccaagctcgccaaagacgtgtgccaactgcccagc
gaggcgcagcacctagcttggctttcgctggaaagcgaagccggccaagagtactgggcc
gccatgaatctggctggcgactacgcctcggcgtgccaccaccagattcatcagcgactg
gccaaggccttgggcgaacggcccctggcaaaagtggaaaaccaccacaactttgcttgg
aaagaacgccttgcgactgggcaggaggtagtggtgcaccgcaagggcgccacgccggcc
ggcgcgggcgtgctgggcatcatccccggctccatgacggcccctggctttattgtgcgg
ggtaggggcgaggcaacatcgctggcatcggcctcacacggggccggccgggccatgtcg
cgcacccgcgccaagcaggagttgggcgaagccgacgtacgacgctacctccagcagcac
cacatcgagctgattgggggcggggtagacgaggctcctcaggcgtacaaagacatccac
gccgtgatggccagccagcacgatctggtggatgtgctgggcacgttcacgccgcgcatt
gtacgcatggaaggcggggtatag
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