Hymenobacter aerilatus: MUN82_17480
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Entry
MUN82_17480 CDS
T09397
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
haei
Hymenobacter aerilatus
Pathway
haei02020
Two-component system
haei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
haei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUN82_17480 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUN82_17480 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haei03021
]
MUN82_17480 (rpoN)
Transcription machinery [BR:
haei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUN82_17480 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
HTH_IclR
LacI
SF3b1
Thioredoxin_4
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UOR04728
UniProt:
A0A8T9SRF0
LinkDB
All DBs
Position
complement(4172919..4174490)
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AA seq
523 aa
AA seq
DB search
MQRLDMKQLLSQKLSPQQIQFIKLLQIPTAELEARIKEELEVNPALEEGDDADDDFEEQD
RDEDDADDDFDDPDAEFDNDDNTLDEDFDRAEEQPELELPQIEESTAEKDTSDDVDLGDY
LNDDEIAGYKMQGDGPGDADEDREMPLADNGASLVDSLLDQLGFVAVSDKQRIIGTQLIG
SIDSDGYIRRDLSAIANDLAFSQNMEASTEEIETVLRLIQSFDPPGIGARDLQECLLLQL
ERRPADPDVENAERILAETYEEFTKKHYARIQQKLDLEDEEIRDAIALILKLNPKPGGSG
PVGMGKVQYIIPDFILTNDNGQFHLSLNARNAPDLRVSPAYTEMFQAYDKASKKDKKMKE
AVTFVKQKLDSAKWFIDAIRQRQQTLLRTMDAIVRYQQDFFAEGDEGRLRPMILKDIAQE
IGMDISTVSRVVNSKAVQTEFGIYPLKYFFSEGIATDSGEDASSREVKHILKEIIDGESK
GRPLSDDKLEKMLNARGYNIARRTVAKYREQLNIPVARLRKEL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgactggatatgaaacagcttctttcgcagaagctgtccccccaacagatacag
tttattaagctactgcagatcccgactgccgagctggaagcccgcatcaaagaagagctg
gaggtgaacccggcgctggaagagggcgacgatgccgatgacgacttcgaggagcaggac
cgggacgaggacgacgccgacgatgatttcgacgaccccgacgccgagttcgacaacgac
gataacacccttgacgaggacttcgaccgggccgaggagcagcctgagctggagctccct
cagatagaagaatccacggccgaaaaagataccagcgacgacgtggatctgggcgactac
ctcaacgacgacgaaatagctggctacaaaatgcagggcgacggccccggtgacgccgac
gaggaccgtgaaatgcccctggccgataacggggcgtcgctggtggatagcctgctggac
cagctgggctttgtagccgtttcggacaagcagcgcattatcggtactcaactcattggc
tccattgacagcgacggctacatccggcgcgacctctcggccattgccaacgatctggct
ttctcccaaaacatggaggctagcaccgaggagattgaaaccgtgctgcgcctgattcag
tcgtttgacccgcccggcattggcgcccgcgacttgcaggagtgtctgctgttgcagctg
gagcgccgccccgccgaccccgacgtggaaaacgccgagcgcatcttggccgaaacctac
gaggagttcactaagaagcactacgcccgtattcagcagaagctggacctggaagatgag
gaaatccgggatgctattgctttgattctgaagttgaaccccaagcccggcggctccggc
ccggtaggcatgggcaaggtgcaatacatcatccccgacttcattctgaccaacgacaac
ggtcagtttcacctttccttgaatgctcgcaacgcgccggatttgcgcgtgtcgccggcc
tacacggagatgttccaagcctacgacaaggcttctaagaaggacaaaaagatgaaggag
gccgtcaccttcgtgaagcagaagctcgactcggccaagtggtttattgatgccatccgg
cagcgccagcaaaccctgctgcgcactatggatgccattgtgcgctaccagcaggacttc
tttgccgagggcgacgaaggtcgcctgcgccccatgatcctaaaggacattgcccaagaa
atcgggatggatatttccactgtgagccgggtagtaaactcgaaggccgtgcagacggag
tttggtatctaccccctcaagtacttcttctcagaaggcattgctactgactcgggcgag
gatgccagctcacgcgaggtaaagcacattctcaaggaaattatcgacggcgagagcaaa
ggacgccccctttccgacgataagctggaaaaaatgttgaacgcccgcggctacaatatt
gcccgccgcacggtagccaaataccgcgagcaactcaacatcccggtagcccgcctacgg
aaagagttgtaa
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