Haloplanus aerogenes: DU502_00680
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Entry
DU502_00680 CDS
T05732
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
haer
Haloplanus aerogenes
Pathway
haer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DU502_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haer03400
]
DU502_00680
DNA repair and recombination proteins [BR:
haer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DU502_00680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_RNaseH
UvrC_M
HHH_5
HHH
HHH_2
UVR
GIY-YIG
5_3_exonuc
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AZH23978
UniProt:
A0A3M0CW84
LinkDB
All DBs
Position
complement(130195..131931)
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AA seq
578 aa
AA seq
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MDATAVRDRAADLPRDPGVYLFYEDDSVRYVGKAVDLRARVRSYADPRSDRIRRMVDRAD
RIDVAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPLVQLTAHDAPRIEVTRDPDEG
ATVFGPFTDKGRVETIVKALRETYGLRGCSDHKYRGRDRPCLDYEMGLCSAPCTGEIDAE
AYAEDVRAAVRFFEGETGVLADPLRREMEAAAQAQSFERAANLRDRLETVESFHGTGGDA
VASPADERTVDVLGAVVEGDRATVARLHSERGQLVDRSRHRLDAPEGEDRAGALLAAFVP
QYYADRELPDAILCSERPDDDEVLAWLESEGVAVRVPGAGREAKLVDLALKNARRRTGGD
DAAARLADELGLDTPPERIEGFDVSHAGGKAVVGSNVCFVDGSAEKSAYRRKKLTERNDD
YANMRELVRWRAARAVDGTDDRPDPDLLLIDGGDGQLAAARDALGETGWDVPTIALAKAE
ERVITPDGVHDWPADASHLHLLQRVRDEAHRFAVQYHGAVRDEVSTALDEVPGVGPETRR
RLLRRFGSVENVREASVADLRDVEGVGEKTADALARRL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgactgcggtgcgcgaccgggcggctgatctgccgcgcgatccgggcgtctac
ctcttctacgaggatgacagcgtccgctacgtcggcaaggcagtcgacctccgggcccgg
gtgcgttcctacgccgacccgcggagcgaccgcatccgacggatggtcgaccgcgccgac
cggatcgacgtggccgtcaccgacaccgagacgcaggcgctcctgctggaggcgaacctc
atcaagcgccaccagccacggtacaacgtccggctcaaggacgacaagtcctacccgctc
gtccaactcaccgcccacgacgccccgcggatcgaggtgacacgcgaccccgacgagggg
gcgacggtcttcggccccttcaccgacaagggtcgcgtcgaaacgatcgtgaaggcgctc
cgggagacgtacggcctccgcgggtgttccgaccacaaatatcgggggcgagaccgtccc
tgtctcgactacgagatggggctgtgcagcgccccctgtaccggcgagatcgacgccgag
gcgtacgccgaggacgtgcgcgcagccgtccgctttttcgagggagagacgggcgtgttg
gccgacccgctccgccgcgagatggaggccgcggcacaggcgcagtcgttcgagcgcgcc
gctaacctccgggatcgactggagacggtcgaatccttccacggcaccggcggcgacgcc
gtcgcttcccccgccgacgagcggacggtcgacgtgctcggcgccgtcgtcgaaggcgac
cgggcgaccgtcgcccgtctccacagcgagcgcgggcaactcgtcgaccgctcgcggcac
cgactcgacgcgcccgagggcgaggaccgggccggcgctctcctcgccgccttcgttccg
cagtactacgccgaccgcgagttgccagacgccatcctgtgttcggagcgcccggacgac
gacgaagtgctcgcgtggctggaaagcgagggcgtcgccgtgcgcgtccccggtgccggc
cgcgaggcgaaactggtcgacctcgcgctgaagaacgcccgtcgacggacgggcggcgac
gacgcggccgcgcgcctcgccgacgaactcggcctcgacacgccgcccgagcgcatcgag
gggttcgacgtgagccacgccggcgggaaggcggtcgtcgggagcaacgtctgcttcgtc
gacgggagcgccgagaagtcggcctaccgccggaagaaactcaccgagcgcaacgacgac
tacgcgaacatgcgcgaactcgtgcgctggcgtgccgctcgcgccgtcgacgggacggac
gaccgccccgatcccgatctcctcctgatcgacggcggcgacggccaactcgctgccgcc
cgcgacgctctcggagagacggggtgggacgtacccaccatcgcgctggcgaaagccgag
gagcgggtgatcacgccagacggcgtccacgactggccggccgacgcatcccaccttcat
ctcctccagcgggtgcgcgacgaggcccaccgcttcgcggtccagtaccacggggccgtc
cgcgacgaggtgtcgacggcgctcgacgaggtgccgggcgtcggtcccgagacgcgccgg
cgactcctccggcggttcgggagtgtcgagaatgtgcgcgaggcgtcggtcgcggatctg
cgggatgtggagggcgtcggcgagaagacggccgacgcgctggcgcgacggttgtga
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