Haloplanus aerogenes: DU502_01470
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Entry
DU502_01470 CDS
T05732
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
haer
Haloplanus aerogenes
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haer03016
]
DU502_01470 (endA)
Enzymes [BR:
haer01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DU502_01470 (endA)
Transfer RNA biogenesis [BR:
haer03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DU502_01470 (endA)
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Paralog
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GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
AZH24127
UniProt:
A0A3G8QRK7
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All DBs
Position
293937..294983
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AA seq
348 aa
AA seq
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MQGTFEGGTVRVGGDARQRFYDARGYGRPLDGNRIELAPVEAAHLLFRGDLDAVVDAEGE
PLDFRAFLVATDAALAFVVYKDLRDRGFYLSPARDGWVDDPDGADFVVYPRGKGPADDAV
AYRVRVAGERETIAAAALGDIVLAVVDEEGELTYLETERVGVEGEMEADEESYYDPPTDL
DAALLADRAVVWEPPAALHDRGFYGQRLHGRNAESGPLQLSLVEAAYLARRGALALDEPR
VVERGRAVEGERFDRRLRAYAALRAAGSVPKSGFKFGADFRTYDTFTTVSEMDHSTRLIR
VVSPDHTFLPRDLSLDVRLAGGVRKRMVFALTDVNEGIDWLSVERLTP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggacgttcgagggcgggaccgtccgggtcggtggcgacgcccgccagcgcttc
tacgacgcccgcggctacggccggccgctcgacggcaaccggatcgaactcgcgcccgtc
gaggccgcccacctcctcttccggggtgacctcgacgccgtcgtcgacgccgagggcgag
ccgctggatttccgcgccttcctcgtcgccacggacgccgccctcgcgttcgtcgtctac
aaggacctccgcgaccggggcttctacctctcgcccgctcgcgatgggtgggtcgacgac
cccgacggcgccgacttcgtcgtctacccgcgtgggaaggggccggccgacgacgcggtc
gcctaccgcgtccgcgtcgccggtgaacgcgagaccatcgccgccgccgccctcggagac
atcgtcctcgccgtcgtcgacgaggagggtgaactcacctacttggagacggagcgagtg
ggtgtcgagggcgagatggaggccgacgaggaatcgtactacgatcccccgaccgacctc
gacgccgcgctcctcgcggaccgggcggtggtgtgggagccgccggccgccctccacgat
cggggcttctacggccagcgactccacggccggaacgccgagtccggcccgctccagcta
tcactcgtggaggcggcgtatctcgcccgtcggggcgcgctcgcactcgacgaacctcgc
gtcgtcgagcgcggacgcgcggtggagggcgagcgcttcgaccgccgcctccgcgcctac
gcggcgctccgggcggcgggtagcgtccccaagagcgggttcaagttcggcgccgacttc
cgaacctacgacaccttcaccaccgtctcggagatggaccactcgacccgcctgatccgc
gtcgtctcgcccgatcacaccttcctcccgcgggacctctccctggacgtgcggctggcg
ggcggggtccggaagcgaatggtttttgcgctgaccgacgtgaacgaggggatagactgg
ctctcggtcgagcgactcacgccctaa
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