Haloplanus aerogenes: DU502_07830
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Entry
DU502_07830 CDS
T05732
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haer
Haloplanus aerogenes
Pathway
haer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU502_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haer03021
]
DU502_07830
Transcription machinery [BR:
haer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU502_07830
Prokaryotic type
Archaeal type
TFB
DU502_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
DZR_2
Zn_ribbon_RPB9
DZR
Trm112p
Cyclin_C
A2L_zn_ribbon
DUF5817
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AZH25292
UniProt:
A0A3M0DUP9
LinkDB
All DBs
Position
complement(1541585..1542571)
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AA seq
328 aa
AA seq
DB search
MSQQSETLRETGGEQRTTTETRTETDERVCPECDSALVVDEARGETVCEACGLVVEADEI
DHGPEWRAFDSNERAEKSRVGAPTTKLLHDDGLSSVIDWQDRDAKGRTIDGSKRRKLQRL
RTWDERFRSKNAQERNLKQALGEIDRMSSALGLPENVRETASVVYRRALEDDLLRGRSIE
AMATASLYAAARQASVPRSLDEFEPVSRVDRKEFSRAYRYIVRELGLAIEPANPLEYLPR
FASDLELDGDTTTRARNLLEEGMESGVHSGKSPVGLAAAALYAASILEGEKITQKEVCSV
SDVSEVTVRNRYTELLEAGTDPDAARAA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagtccgaaaccctccgagagaccggtggggaacagcgtacgacgaccgag
acacggacggagaccgacgaacgcgtctgtccggagtgtgattcggcgctcgtcgtcgac
gaagcacgcggcgagacggtgtgtgaggcgtgtggtctcgtcgtcgaggcggacgaaatc
gaccacggccccgagtggcgcgccttcgactcgaacgagcgcgccgagaagagccgggtc
ggcgccccgacgacgaaactcctccacgacgacggtctctcgtcggtcatcgactggcag
gaccgcgacgccaaaggccgaaccatcgacgggagcaagcgtcggaaactccagcgcctc
cggacctgggacgagcgcttccgctcgaagaacgcgcaggagcgcaacctgaagcaggcg
cttggcgagatcgaccggatgtcgtcggcgctcggcctccccgagaacgtccgcgagacc
gcgagcgtcgtctaccgccgggcactcgaggacgacctcctccgtggtcgatccatcgag
gcgatggcgacggcctccctgtacgccgccgcccggcaggcgtcggtgccgcggagtctc
gacgagttcgaacccgtcagccgcgtcgaccgcaaggagttctcgcgggcctaccgctac
atcgtccgcgaactcggcctcgccatcgaacccgccaacccgctcgaatatctcccgcgg
ttcgcgtccgacctcgaactcgacggcgacacgacgacccgcgcccgcaacctcctcgaa
gagggcatggagagcggcgtccacagcgggaaaagtcccgtcggcctcgcggcggcggcg
ctctacgccgcctcgatcctggaaggcgagaaaatcacgcagaaggaggtgtgctccgtg
agcgacgtgtccgaagtgaccgtccgcaaccgctacaccgaactgctggaagccggaacc
gatccggacgcggcgcgcgccgcctag
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