Haloplanus aerogenes: DU502_08660
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Entry
DU502_08660 CDS
T05732
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haer
Haloplanus aerogenes
Pathway
haer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU502_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haer03021
]
DU502_08660
Transcription machinery [BR:
haer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU502_08660
Prokaryotic type
Archaeal type
TFB
DU502_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
HTH_Tnp_ISL3
Cas12f1-like_TNB
HTH_24
A2L_zn_ribbon
Auto_anti-p27
Zn_ribbon_tTFIIB
DZR_2
Zn_ribbon_RRN7
TrmB
Motif
Other DBs
NCBI-ProteinID:
AZH25446
UniProt:
A0A3M0DSI4
LinkDB
All DBs
Position
complement(1708283..1709263)
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AA seq
326 aa
AA seq
DB search
MSDTTTYYTETAESEQERAESEAETETTPTCPECTGNLVTDEEHGETVCADCGLVVEEDE
IDHGPEWRAFDSSERDSKSRVGAPTTTMMHDKGLSTNIGWQNKDAYGKTLSSRQREKMQR
LRTWNERFRTRNSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALADDLLPGRSI
EGVATAALYAAARQAGTPRSLDEIATVSRVDKMELTRTYRYVVRELKLEIQPADPEQYVP
RFASDLDLSEEATRQARELLRSSRERGVHSGKSPVGLAAAAVYAAALLTNETVTQSEVSE
VANISEVTIRNRYKELLEAKAEADAR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccacgacctactacacggaaacggccgaaagcgagcaggagcgagcggaa
agtgaagcagaaaccgaaactacacccacctgtccggagtgtaccggtaacctcgtgacc
gacgaggaacacggcgagacggtgtgtgcggactgcggactggtcgtcgaggaagacgag
atcgaccacggccccgagtggcgcgctttcgactccagtgagcgcgactccaagtcacgc
gtcggcgccccgacgacgacgatgatgcacgacaagggcctgtcgacgaacatcggctgg
cagaacaaggacgcctacggcaagacgctctcgtcccgtcaacgcgagaagatgcagcgc
ctgcgcacctggaacgagcgcttccgcacgcggaactcgaaagaacgcaacctgaagcag
gctctcggcgaaatcgaccggatggcctccgcgctcggtctccccgagaacgtccgcgag
acggcgtcggtgatctaccgccgcgccctcgccgacgacctgctccccggccgctccatc
gagggcgtcgccaccgccgcgctgtacgccgccgcccggcaggcgggcacgccccgctcg
ctcgacgaaatcgctaccgtctcccgcgtcgacaagatggaactcacccggacgtaccgc
tacgtcgtccgcgaactcaaactcgaaatccagcccgcagatcccgagcagtacgtcccc
cgcttcgcctcggatctcgacctctccgaggaggcgacccgacaggcccgcgaactcctc
cgctcgtcgcgcgagcgtggcgtccacagcggcaagagccccgtcggcctcgccgccgcg
gccgtctacgccgccgccctcctcaccaacgagacggtgacccagagcgaggtcagcgag
gtggccaacatcagcgaagtcactatccgcaaccggtacaaggaactgctggaagcgaaa
gcggaagcggacgcgcgctaa
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