Haloplanus aerogenes: DU502_16535
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Entry
DU502_16535 CDS
T05732
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haer
Haloplanus aerogenes
Pathway
haer03420
Nucleotide excision repair
haer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DU502_16535
03430 Mismatch repair
DU502_16535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haer03400
]
DU502_16535
Enzymes [BR:
haer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DU502_16535
DNA repair and recombination proteins [BR:
haer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DU502_16535
MMR (mismatch excision repair)
Other MMR factors
DU502_16535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Herpes_ori_bp
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AZH26883
UniProt:
A0A3M0CSH3
LinkDB
All DBs
Position
3224704..3226548
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AA seq
614 aa
AA seq
DB search
MSDDATVTRLFGGPGSGKTTALLDRVDELLENDDVSIRDVLVVSYTRAAAAEVRERLAER
LDVSPRALQGNVCTMHAKAYELLDLSRGDVVGESDKEEFCEEYGIEYEDEYGGAGRRTAR
STTLGNKIIATSQWLQRTQRDVADWYDVPFQWDVETVRLPPDIDPNAQEGNKYTPTWPTD
DDRIDVPEVIRAWRAYKGEHGLVGFADMLERVAQRSLVPHVDYLVIDEFQDITTLQYEVY
EEWKPHMEGVLIAGDDDQVVYAWQGADPNILLDAEVHEDIVLPNSYRLPSRILNVVNREI
RHIDKRQEKDLNPRKEGGVVEGIQNPSMFEVVRNVQHTVDTTDETLMILFRARYQMFQFI
DDFLPKGIPFSVMTDQRMWTDRLTQYVRAVEKLEADDPITGLEARRLADMLQDSAFGTNE
RDDFYDTLDDREEEADVEDIAEIEISADVVNDHIPFMPDAASAGDMLRKVTSFQRNSVDA
YFGGEYQGMDPSRVRVGTIHSAKGREADHVFVCTDLTEKVVEQMAASVDDPTDVDGVEEF
TAHTSPVPLLTDNERRVFYVGMSRARERLVLLENLIGGAPTLPISVVLHNELRDEGVEAM
LEEAQETPAPEPEP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgctacggtcacccgcctcttcggtggccccggtagcgggaagacgacg
gccctcctcgaccgcgtagacgaattgctggaaaacgacgacgtgagcatccgcgacgtc
ctcgtcgtctcgtacacccgggccgcggccgcggaggtgcgcgaacgcctcgccgagcga
ctcgacgtgtcgccccgcgcgcttcaggggaacgtctgtacgatgcacgcgaaggcgtac
gaactgctcgacctctcgcggggcgacgtggtcggcgagagcgacaaggaggagttctgc
gaggagtacggcatcgagtacgaggacgagtacggcggcgcgggtcgacgaacggcccgg
tcgacgacgctcggcaacaagatcatcgccaccagccagtggctccagcgcacccagcgc
gacgtggccgactggtacgacgtgcccttccagtgggacgtggagacggtccgcctccca
cccgacatcgaccccaacgcacaggaagggaacaagtacacgccgacgtggccgaccgac
gacgaccggatcgacgtgcccgaagtcatccgcgcgtggcgcgcgtacaagggcgaacac
ggcctcgtcggcttcgcggacatgctcgaacgggtggcccagcggtcgctcgtccctcac
gtcgactacctcgtcatcgacgagtttcaggacatcaccaccctccagtacgaggtgtac
gaggagtggaaaccccacatggagggcgtcctcatcgccggcgacgacgatcaggtcgtc
tacgcctggcagggcgccgaccccaacatcctcctcgacgccgaggtgcacgaggacatc
gtgttgcccaactcctaccgcctcccctcgcgcatcctcaacgtcgtcaatcgggagatt
cgccacatcgacaagcgacaggagaaggacctgaacccgcgcaaggagggcggcgtcgtc
gaggggattcagaacccctcgatgttcgaggtggtgcggaacgtccagcacaccgtcgac
accaccgacgagacgctgatgatcctcttccgggcgcgctaccagatgttccagttcatc
gacgacttcctcccgaagggcatcccgttctcggtgatgacggatcagcggatgtggacc
gaccgcctcacccagtacgtccgcgccgtcgagaaactggaggccgacgacccgatcacg
ggactggaagcgcgccgcctcgccgacatgcttcaggattcggcgttcgggacgaacgag
cgcgacgacttctacgacacgctcgacgaccgcgaggaagaagcggacgtagaggacatc
gccgaaatcgagatatcggcggacgtggtgaacgaccacatccccttcatgcccgacgcc
gcctccgcgggcgatatgctccgaaaggtgacgagtttccagcgcaactccgtcgacgcc
tacttcggcggggagtatcagggcatggacccgagtcgcgtccgcgtcggcaccatccac
tccgcgaagggtcgcgaggccgaccacgtcttcgtctgtaccgacctcaccgagaaggtg
gtcgagcagatggccgcgagcgtcgacgatccgaccgacgtggacggcgtcgaggagttc
accgcccacaccagtcccgtcccactcctcaccgacaacgagcgccgcgtgttctacgtc
gggatgagccgggcgcgggaacggctcgtcctcctggagaacctcatcggcggcgccccc
accctcccgatcagcgtcgtgttgcacaacgaactgcgcgacgagggcgtggaggcgatg
ctggaggaggcccaggagaccccggctcccgaacccgagccgtga
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