Haloplanus aerogenes: DU502_17470
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Entry
DU502_17470 CDS
T05732
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
haer
Haloplanus aerogenes
Pathway
haer03030
DNA replication
haer03420
Nucleotide excision repair
haer03430
Mismatch repair
haer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DU502_17470
03420 Nucleotide excision repair
DU502_17470
03430 Mismatch repair
DU502_17470
03440 Homologous recombination
DU502_17470
03460 Fanconi anemia pathway
DU502_17470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haer03000
]
DU502_17470
03032 DNA replication proteins [BR:
haer03032
]
DU502_17470
03400 DNA repair and recombination proteins [BR:
haer03400
]
DU502_17470
Transcription factors [BR:
haer03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
DU502_17470
DNA replication proteins [BR:
haer03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
DU502_17470
DNA repair and recombination proteins [BR:
haer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
DU502_17470
MMR (mismatch excision repair)
DU502_17470
DSBR (double strand breaks repair)
HR (homologous recombination)
DU502_17470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
OB_MEIOB_N
DUF5666
Motif
Other DBs
NCBI-ProteinID:
AZH27054
UniProt:
A0A3M0CYG9
LinkDB
All DBs
Position
3406942..3408405
Genome browser
AA seq
487 aa
AA seq
DB search
MGVIEDVYEDLDTDVEFEEFEAAVHDKVEQMGGLADEETAAMLIAHELEDEEVSGVADIE
PGMDEVKFLAKVVGVGDLRTFEREGDGDDDEEEVDEGRVINVEVADETGQVRISFWDRMA
QSVADGELDVGDVLRIKGRPQEGYSGVEVSVDQAEVDEDADVDVQVQDTYRIDDLSLGLS
DVNLQGRVLATDSVRTFDRDDGSEGRVANLTLGDETGRVRVTLWDEKADRAEELDSGTSV
EVVDGYVRERDGDLELHVGSRGAVEEIDDDISYDPETDDISSLELGQTADLAGGVIETDP
KRTFDRDDGSEGQVRNVRIKDETGDIRVALWGEKADLDIDLADYVVVTDAEIQEGWQDDL
EASAGWRATVTVTDPPSDAPGTDASGSGDTANAGGVSGSGSPGLDAFGDEGASSADTATG
GSSANATTADGETVQFTGTVVQAGNPVVLDDGTETRSVETDADLRLGEEVTVRGPIHDGR
IDADEVY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaatcgaggacgtgtacgaggacctcgacacggacgtggagttcgaggagttc
gaggccgccgtccacgacaaggtcgagcagatgggagggctcgccgacgaggagacggcg
gcgatgctcatcgcccacgagttagaggacgaggaggtgagcggcgtcgcggacatcgaa
cccggcatggacgaggtgaagttcctcgcgaaggtagtcggcgtcggtgacctgcggacg
ttcgaacgcgagggcgacggtgacgacgacgaggaggaggtcgacgagggacgcgtcatc
aacgtcgaggtggccgacgagaccggacaggtgcgtatctccttctgggaccgcatggcg
cagtccgtcgccgacggcgaactcgacgtgggcgacgtgttgcggatcaagggccgacca
caggaggggtacagcggcgtcgaagtgagcgtcgaccaagcggaggtcgacgaggacgcc
gacgtggacgtacaggtgcaggacacctaccgcatcgacgacctctcgctcggcctctcg
gacgtgaacctgcaggggcgagtgctggcgacggattccgtgcggaccttcgaccgcgac
gacgggagcgagggtcgcgtcgccaacctgaccctcggcgacgagacggggcgcgtgcgg
gtgacgctgtgggacgaaaaagccgaccgggccgaagaactcgactccggtacgtcggtc
gaagtcgtcgacgggtacgtccgggaacgcgacggcgacctcgaactccacgtcggatcg
cgcggcgcagtcgaagagatcgacgacgacatcagctacgacccggagacggacgacatc
tcgtcgctggaactcggccagacggccgacctcgccggcggcgtcatcgagaccgatccc
aagcgaacgttcgaccgcgacgacgggagcgagggacaggtgcggaacgtgcgtatcaaa
gacgagacgggcgacatccgggtcgcgttgtggggcgagaaagccgacctcgatatcgac
ctcgcggactacgtcgtcgtcaccgacgccgagattcaggaggggtggcaggacgacctg
gaggcctccgccgggtggcgtgcgacggtgacggtgaccgatccgccgagcgacgcgccg
gggaccgacgcgagcgggtcgggggatacggcgaacgcgggcggcgtgagtgggagtggc
agtcccggcctcgacgcgttcggagacgagggggcaagcagcgcggacacggcgacggga
ggatcgagtgcgaacgcgacgaccgccgacggcgagaccgtccagttcacggggacggtc
gtgcaagcagggaatccggtcgtcctcgacgacgggacggagacgcgaagcgtcgagacg
gacgccgatctccgactgggtgaggaggtaaccgtccgcggaccgatccacgacggccgg
atcgacgcggacgaagtgtactga
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integrated database retrieval system
