Haloplanus aerogenes: DU502_17855
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Entry
DU502_17855 CDS
T05732
Name
(GenBank) transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haer
Haloplanus aerogenes
Pathway
haer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU502_17855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haer03000
]
DU502_17855
03021 Transcription machinery [BR:
haer03021
]
DU502_17855
Transcription factors [BR:
haer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
DU502_17855
Transcription machinery [BR:
haer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DU502_17855
RNA polymerase III system
TFIIIB
DU502_17855
RNA polymerase I system
SL1/TIF-1B
DU502_17855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
AZH27286
UniProt:
A0A3M0CFZ7
LinkDB
All DBs
Position
pJCM16430-01:15413..15946
Genome browser
AA seq
177 aa
AA seq
DB search
MEIVSTMGSGSLGRELDLDVFVDALQEAVEYDVNPSYSDSGMITVRLEPEGVAYLFYRSG
SFQIRGAENQAALEKAEARLQEVFAEIGLEVPEYSFEQRTAVFMENLDRSIDLERLMIEL
GLEHTEYEPEQFPALIYKPPAFEVTLLIFSSGKIIIGGTMSKRTAQEAIDHLTKSPG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggagatagttagtacgatgggatcgggctcgctcggtcgcgagctggatctcgatgtg
ttcgtcgacgctctacaggaggcagttgagtacgatgtaaacccgagctacagcgactcc
ggaatgatcacggttcgcttagagccggagggtgttgcctatctgttctaccgcagtgga
agcttccagattcgcggtgccgagaatcaagcggctctggagaaagcggaggcccgactt
caggaggtgtttgctgagatcggcctagaggttcccgagtactcgttcgaacaacgaacg
gccgtcttcatggagaatctggaccggtctattgatttggaacggctaatgatcgaactc
gggctcgaacacaccgaatacgaaccggaacagttcccggcactcatctacaaacctcca
gccttcgaggtgacgcttctcattttctccagcgggaagatcatcatcggcggaacgatg
agtaagcgtaccgctcaggaggccattgaccatctgactaaatcccccggctag
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