Halopseudomonas aestusnigri: LO767_02925
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Entry
LO767_02925 CDS
T07924
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LO767_02925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
haes02022
]
LO767_02925
02035 Bacterial motility proteins [BR:
haes02035
]
LO767_02925
Two-component system [BR:
haes02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LO767_02925
Bacterial motility proteins [BR:
haes02035
]
Pilus system
Twitching motility proteins
LO767_02925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
AAA_16
HTH_50
HTH_30
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UGV31477
LinkDB
All DBs
Position
complement(642108..643451)
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AA seq
447 aa
AA seq
DB search
MMQPTVLIIDDEPDILELLELTLGRMSLQTRSAKTMGEALNLLQSHHFDLCLTDMRLPDG
DGLSIVRHIQQHFTSTPVAMITAYGSLDTAISALKAGAFDFLTKPVDLARLRELVSTALR
LRDSQTEPGPQAQDPILGISPPIERLRNQISKLARSQAPLYISGESGSGKELVARRIHAL
SPRAEQPFVPVNCGAIPSELMESEFFGHRKGSFSGAVADKPGLFQAANHGTLFLDEVADL
PMAMQVKLLRAIQEKAVRAVGSQHEEAVDVRLLCATHKDLANEVAQGRFRQDLFYRINVI
ELQVPPLRARREDLPLLVRSILSRLAERANRPAPAVTEAGMERLLNYRFPGNVRELENAL
ERAFTLCEGQQIDANDLWLSACPSAAQDDTPDFSQIDHLEDYLDNIERQAITQALEETRW
NKTAAAKRLGLTFRSLRYRLKKLGLDD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacccaccgtgctgatcatcgacgacgagccggacattctcgaattgctggag
ctgaccctcgggcgcatgtcgctgcaaacccgcagcgcgaaaaccatgggcgaagccttg
aacctgctgcagtctcaccactttgatctgtgcctgacggacatgcgactgcctgacggc
gatggcctgagcatcgtacgccatatccagcaacactttaccagcaccccggtcgcgatg
atcaccgcctatggcagtctggatacggcgatcagcgcacttaaggccggcgcatttgac
ttcctgaccaaaccggtcgatctcgcccgcctgcgcgagctggtctcgaccgcactgcgc
ctgcgagattcgcagaccgaacccgggccccaggcacaggacccgatcctcggcatctcg
ccaccaatcgagcgactgcgcaaccagatcagcaaactggcgcgcagtcaggcgccactg
tatatcagcggcgagtccggcagcggcaaggaactggtagcccgtcgcattcacgcgctc
agccccagagccgaacagccctttgtaccggtcaactgcggcgccataccgtccgagttg
atggaaagcgagtttttcggccaccgcaaaggcagcttttccggtgcagttgccgacaag
ccgggcctgttccaggccgccaatcacggtactctgtttctcgacgaggtcgccgacctg
ccgatggccatgcaggtcaagctgctgcgggcaatccaggagaaggcggttcgcgcagtc
ggcagccagcacgaggaagcggttgacgtacgtctgttgtgcgctacccacaaggatctc
gccaacgaggtagcccagggacgcttccgccaggacctgttctaccgcatcaacgtgatc
gaactgcaggtgccaccgctgcgggcgcgccgcgaggacctgccgctgctggtccgcagt
atcctcagccgcctggccgagcgcgccaaccgtcccgcgcccgcggtcaccgaggccggt
atggaacggctgctcaattaccgcttcccgggcaacgtacgcgagctggaaaatgcgctg
gagcgggccttcaccctgtgcgaaggccagcagatcgacgccaatgacctgtggctcagc
gcctgcccaagtgcggcccaggatgacactcccgatttcagtcagatcgaccatctggag
gattatctggacaacatcgagcgccaggcgatcacccaggcactggaagagacccgctgg
aacaagaccgccgccgccaagcggctgggtctcacctttcgctccctgcgctaccgcctg
aagaagctgggcctggacgactga
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