Halopseudomonas aestusnigri: LO767_05070
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Entry
LO767_05070 CDS
T07924
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
haes01011
]
LO767_05070
Enzymes [BR:
haes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LO767_05070
Peptidoglycan biosynthesis and degradation proteins [BR:
haes01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LO767_05070
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
DUF1949
Motif
Other DBs
NCBI-ProteinID:
UGV31863
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Position
complement(1106972..1108534)
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AA seq
520 aa
AA seq
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MRRVVSAILPRVLSAASLGGLLLIAGCQTTDHSGLSQSEADYRSPVTERTASPFRTPSAQ
AAASQAVQTKPHTLWGRIRAGFSLDPATIDNPRIDQQRIAFANQSRYFELTSARAQRYLY
YVVEQLESRDMPQELALLPFIESAYNPQAISSAQAAGLWQFIPSTGRNFSLRQDWWYDGR
RDVTASTQAALDYLSLLHDYFDGDWLLALAAYNCGEGCVGRAIKRNEALGLPTDYWNLQL
PRETMNYVPKLLALAQIVDSPTAYGTVLPSLANEPYFAEVTLDQQIDLRKVAELADVSTD
ELLSLNPAFNQRVTAPNAEYQLLIPVDRVDQFTEALAELPDDERINYRHYRVRSGDTLSQ
IARRHQLTVSAIRDVNDINGTLLRVGQTLMLPQFNDAPVSQPVSSQRIAGVEQLRYRVKP
GDNLWSIARSHGTTVNRIKRDNNLQDSALTVGHTLMLASAAQTQAQPATANGRRIAYTVK
SGDSLYTIAQRFNVNVERIRDWNQLGRYLQPGQQLTLFVP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtgtggtatctgccatcttgcccagagtgctgtcagcagcgtccctcggtggt
ctgctgctgattgccggctgtcagaccaccgaccacagcggactgagccagagcgaagcc
gattaccgctcaccggtcacagaacgcacagcatccccattccggacgcccagcgcacaa
gccgccgcatcgcaagccgtacagaccaaaccgcataccctgtgggggcgtattcgagcc
ggtttcagccttgacccggcgaccatcgacaacccccgaatcgaccagcagcgcatcgcc
ttcgccaaccagtcacgctacttcgagctgacctccgcgcgagcgcagcgttacctctat
tacgttgtcgagcagctggaaagccgcgacatgccgcaggagctggcactgctgccattc
atcgaaagtgcctataatccgcaggccatctccagcgcccaggctgccggcctgtggcag
ttcattccgtccaccggacgcaacttctcgctgcgtcaggactggtggtacgacggtcgc
cgcgacgtaaccgcctccacccaggcggcgcttgattacctcagcctgctgcacgactac
ttcgatggcgactggctgctcgcgctggccgcctacaactgcggcgaaggctgcgtgggc
cgagccatcaagcgcaacgaagcactcggcctgccaaccgattactggaacctgcagctg
ccgcgcgaaaccatgaactacgtacccaagctgctggctctggcgcagatcgtcgacagt
ccgaccgcctacggcaccgtgctgccaagcctggccaacgaaccctacttcgccgaggtt
accctcgatcagcagatcgacctgcgcaaggtcgcggagctggccgacgtctccaccgac
gagctgctgagcctgaaccccgcgttcaaccagcgggtcaccgcgcccaacgccgaatac
cagttgctgattccggtcgaccgggttgaccagttcaccgaagcgctggccgagctgccg
gacgatgagcgcatcaactaccggcactatcgcgttcgcagtggcgacaccctctcgcag
attgcccgtcgtcaccagctgaccgtcagcgccatccgcgacgtcaacgacatcaacggc
accctgctgcgcgtcggccagaccctgatgctgccccagttcaatgatgcccccgtcagc
caaccggtcagcagccagcgtatcgccggcgtcgagcagctgcgctaccgggtaaagcca
ggcgacaacctgtggagtatcgcccgcagccacggcactaccgtgaatcgcatcaagcgc
gacaacaatctgcaggacagcgccctgaccgtcggtcacaccttgatgctggcgtcggca
gcacagacgcaggcccaacccgccacagccaatggacggcgcattgcctataccgtcaag
tcgggcgactcgctgtacaccatcgcccagcgcttcaatgtcaacgtcgagcggattcgc
gactggaaccagcttggccgctacctgcagccgggccagcagttgaccctgttcgtccct
tga
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