Halopseudomonas aestusnigri: LO767_07195
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Entry
LO767_07195 CDS
T07924
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haes03009
]
LO767_07195 (rimO)
Enzymes [BR:
haes01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LO767_07195 (rimO)
Ribosome biogenesis [BR:
haes03009
]
Prokaryotic type
ribosomal protein modification factors
LO767_07195 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UGV32258
LinkDB
All DBs
Position
complement(1566712..1568043)
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AA seq
443 aa
AA seq
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MSTPSNAPKVGFVSLGCPKALVDSERILTQLRTEGYQVVPTYEDADVVVVNTCGFIDTAK
AESLDAIGEAIAENGRVIVTGCMGVEESAIRDVHPSVLAVTGPQQYEQVVNAVHEVVPPK
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLAKAGVKEVLVISQDTSAYGVDIKYRTGFWNGRPVKSRMTEMCEALSELGIWVRLHYVY
PYPHVDELIPLMAEGKILPYLDIPFQHASPTVLKAMKRPAFEDKTLARIKKWREICPELT
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFKYSPVEGAPANDLGLEAIPEDVQQD
RWERFMAHQQAISSARLQQKIGKTIQVIIDEVDDEGPIGRSMADAPEIDGNVYLDTDEDL
KPGDIVSVVVTDADEYDLWAQLA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccgtccaacgcccccaaagttggctttgtttcactcggctgcccgaaggca
ttggtcgattccgagcgcattctgacccagctgcgcaccgaaggttatcaggtggtcccc
acctacgaagacgctgatgtggtggtggtcaacacctgcggttttatcgataccgccaag
gccgaatcgctggacgctattggcgaggccatcgccgagaacggtcgcgttatcgtcacc
ggttgcatgggcgtcgaagaaagcgcgatccgtgacgtgcacccgagtgtgctcgccgtc
accggtcctcagcagtatgagcaggtagtcaatgcggtgcatgaagtcgtgccaccgaaa
caggatcacaatccgctgatcgacctggtaccgccacagggcgtcaagctgactccccgc
cattatgcctacctgaagatttccgagggctgcaaccacagctgcagcttctgcatcatc
ccatccatgcgcggcaagctggtcagccgtccggtgggtgaagtgctgagcgaagccgag
cgtctggccaaagccggtgtcaaggaggtgctagtcatctcccaggacaccagcgcctat
ggtgtcgacatcaagtaccgcaccggcttctggaacggtcgcccggtcaagtcgcgcatg
accgaaatgtgcgaagcgctcagtgaactgggtatctgggtgcgtctgcactacgtctac
ccgtacccgcacgtggatgagctgatcccgctgatggccgagggcaagatcctgccgtat
ctggacatcccgttccagcacgccagcccgaccgtactcaaggccatgaagcgcccggca
tttgaagacaagaccctcgcgcggatcaagaaatggcgcgagatctgccccgagctcact
atccgctcaacctttatcgtcggcttcccgggcgaaaccgaggaagacttccagtacctg
ctggactggctgaccgaagcgcagctcgatcgcgttggctgcttcaagtactccccggtc
gaaggcgcgccggccaatgatctggggctggaagcgattccggaggatgtgcagcaggat
cgctgggagcgtttcatggcgcaccagcaggcgatctcctctgcacgcttgcagcaaaag
atcggcaagaccatacaggtcatcatcgatgaagttgacgacgaaggccctatcggccgc
tcgatggccgatgcgccggagatcgacggtaacgtgtacctggacaccgacgaagacctc
aagccgggcgatatcgtcagcgttgtagtcaccgacgccgacgagtatgacctctgggcg
cagctggcctga
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