KEGG   Halopseudomonas aestusnigri: LO767_08415
Entry
LO767_08415       CDS       T07924                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
haes  Halopseudomonas aestusnigri
Pathway
haes03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:haes00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LO767_08415 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haes02044]
    LO767_08415 (tssM)
Secretion system [BR:haes02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LO767_08415 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: UGV32475
LinkDB
Position
1820913..1824236
AA seq 1107 aa
MKALYQRVASYLRKPAGWSLLILLILAALIWVLGPNIAFNGNAILAGPGSRLLAGTILLS
PWLVWQLLDQLKQRRANGEQAASNAATLQARVALEQRYRLSRHLLAEHGVSQRQQRRQPW
YLLLGPENSGKKRLFASAELSGYCTTVTAPHGPQGISPAEWHSLSHCSWLQVGGSCLPSA
DQEPPSPAWTALLGLLRQRRAPALNAIALMLPMDLLTTQNTLELDQLARRYRLALSTLRK
ALGLDLPIYLLLSKADLLPGIIELCQQLTPEQRLQPLGATLPGAPNPAQASTGALGPLLA
QLNRQILCRTQQESDSLRRGRLYDLPYQLAKLEGSLRQFLNQAFDSNSYQHGSRVHGIYL
TIAASEHDVLVPGSLPRPSVQGAFSRRLLENPLAGRPDGVTVADEQRTRQRTRQRVTVGL
AAACVTLSATGWAWRYGHEAEQLQQLAELGRHVVQDGAAVQAHSRIEPLLQQLDTRYAAT
LIPQPASMPAGLQRLSLEQSEATLPVVEKAYADALRTFLLPLVMRQLEYRLSTDLEDRQQ
LIGHLRAYLMLGLPERLDSAYLEDWMHTEWTRRYPRQPAVRESLEAHLSRLLASAPMPQT
LDESLVASAREIMRQEPLPRLCYRLLRERSRSLPDYRLDARLGRHHRLLTSEPVDIPGFY
INTGYERLIKIRGPALIHDLLADDWVLGLAEPVNRQTEQALMADVESIYFQDYTSHWNRA
LASLRLQPQSGASADQLAALSSGHSPLLALLQEIRLHTRLITADDPTPSAGKLAMQQHFS
HLHRLLDDDAMPAPELAGALQSIGQLQHQLAQLSDSSARGLLAYKMASARMQRQRDAIGA
TRDSAAQLPPPLQLWVKQLADQSWRTVLSAAAEYLNGQYRSQVYRPYRDAIADYYPFNPA
SQREVELGDFQRFFQQEGTIQGFTDQYLEPFLISTDADYRLRLLDGRALPISARLLTQLN
RARTIHDSFFASNPLEPGIGFRLEPYSLDASLSRASFYYGSHQLEYRHGPIIPKAFTWPA
SLDDSRISLTLEDLGGRRMTLHGQQGTWSLFRLLEQLTLEQEEQRDALQLRANIGGMRAR
YLLHSQRSPNPFQPGLLAGFNLPARLQ
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgaaggccctttatcagcgggtagcctcctatctgcgcaaacctgccggctggtctctg
ctgatactgctgatcctcgctgccttgatctgggtactcggcccgaacatcgccttcaac
ggcaatgccatactggccggccccggcagccgcctgctggctggtacgattctgctctcg
ccctggctggtctggcagttgctcgatcagctcaagcaaaggcgagcaaacggcgagcaa
gccgccagcaacgcagcaaccctgcaggcccgcgtcgccctggaacaacgctacagattg
agtcgccacctgctggcagagcacggggtaagccaacgccagcaacgtcgacaaccctgg
tatctgctgctcggcccggagaactcgggcaagaagcgcctgtttgcaagcgcagagtta
agcggatactgcacaactgtcactgccccccatgggccccaggggatcagcccggcagag
tggcacagcctcagccactgcagttggcttcaagtgggtggcagttgcctgccgtccgca
gatcaggagccaccttcaccggcctggacagcactgctggggctattgcgtcagcgtcgg
gcgccggcgctcaatgccatcgcgctgatgctgccaatggacctgctgaccacgcagaac
acccttgagctcgaccaactggcacgccggtacaggcttgcactgagcacgttgcgcaag
gcactgggactggatctgccgatttacctgctgctgagcaaggccgatctgctgcccggc
atcattgagttatgccagcaactgacaccggagcagcgtctgcagccactgggcgcgacg
ctgccgggtgcaccgaacccggcacaggccagcaccggtgcccttggcccactgctggct
cagctgaatcgtcaaatcctctgtcgaacccaacaggagtcggacagcctgcgccgcggc
cgtctttacgatcttccctatcaactggcgaaactggaagggtcgcttcgtcagttcctc
aaccaggcatttgacagcaacagctaccagcatggcagtcgagtgcatggaatctatctg
acgatcgctgccagcgaacacgacgttctggtccccggctcgctgccgcgcccttcggtt
caaggcgccttcagcaggcgactgctggaaaacccccttgccgggcggcctgatggcgtc
acggttgcagacgagcagcgcacgcgacaacgcaccaggcaacgggtcacggtcggtctc
gccgcagcctgtgtgacactgtctgcaactggctgggcttggcgctacgggcacgaggcc
gagcagctgcagcaacttgccgagcttggccgacacgtcgtccaggatggtgccgcggtc
caggcacacagccgaatcgaacccttgcttcagcagctcgatacccgctacgcagcaacg
ctgataccccagccggcgtcgatgcctgccggcctccagcgcctgagtcttgagcagtcc
gaggcgactctgccggtagtcgaaaaggcctatgcagatgcactgcgcaccttcctgctg
ccactggtaatgcgtcagctggaataccgtctgagcaccgaccttgaagaccgccagcag
ttgatcgggcacctgcgcgcctacctgatgctgggtctgccggagcgtctggacagcgcc
taccttgaggactggatgcacacggagtggacgcgccgctaccccagacaacccgcggtc
agagagagcctggaggcccatctaagccgccttcttgcctccgctccaatgccccagacg
cttgatgagtctctggtagccagcgccagggagatcatgcggcaagagccactgccccgg
ctttgctaccgattgctccgggaacggtccagatccctccccgactaccgcctcgatgcc
cgccttggacgccaccaccggttactgacatccgaaccggtcgacattcccgggttctac
atcaataccggctatgaacgcctgatcaaaatcagaggtccggcgctgattcatgacttg
ctggccgacgactgggtactgggcctcgccgaaccggttaacaggcaaaccgagcaggcg
ctgatggcagacgtggagagcatctactttcaggattacacctcgcattggaatcgcgct
ctggccagcctccgcctgcaaccacagtccggcgctagcgcggatcagctggcggcgctc
tcgtccgggcactcccccctgctggcgctgctgcaggagatcaggctgcatactcgactg
ataacagctgacgacccaacacccagcgcaggcaagctggccatgcaacagcacttcagc
caccttcaccgcctgcttgatgacgatgccatgcccgctccggaattggctggcgcattg
caaagcatcggtcaattgcaacaccagctcgcccagctcagcgacagcagcgcccgcgga
ctgcttgcctacaagatggccagcgcacgcatgcagcgccaacgcgatgcaatcggcgcg
acccgcgacagcgcagctcagctgccgccgccgctgcagctatgggtgaagcagcttgcc
gaccagagttggcgaaccgtgctgagcgcagcggccgagtatctgaacggccagtatcgc
agccaggtgtatcgcccataccgggacgcaatcgccgactactacccattcaatccggcc
agtcagcgggaagtggagctaggcgacttccagcgtttcttccagcaggagggcactatt
caaggctttaccgaccagtatctggagccatttttgatcagcacggacgcagactaccgg
ctgcgactgctggacgggcgggcattgcccatatccgcaaggctgctgacacaactgaac
cgggccaggaccattcacgacagtttttttgccagcaatccgctcgagccgggcatcggg
tttcgcctggaaccctactcacttgatgccagcctcagccgcgccagcttttattacggg
agccatcagctggaatatcgccacggccccatcattcccaaggcgttcacctggccggca
agccttgacgacagccgcatcagcttgactctggaggatctgggaggccggcgaatgacc
ctgcacggccagcagggtacctggtcgctgtttcgcctgcttgagcaactgacactcgag
caggaggaacaacgcgacgcgcttcagctgcgggccaatatcggcggcatgcgtgcccgc
tatctgctgcacagtcaacgctctccaaacccgttccagcccggcctgctggcgggcttc
aacctcccggcccgcctgcaatga

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