Halopseudomonas aestusnigri: LO767_09875
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Entry
LO767_09875 CDS
T07924
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LO767_09875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haes03019
]
LO767_09875 (recQ)
03400 DNA repair and recombination proteins [BR:
haes03400
]
LO767_09875 (recQ)
Enzymes [BR:
haes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LO767_09875 (recQ)
Messenger RNA biogenesis [BR:
haes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LO767_09875 (recQ)
DNA repair and recombination proteins [BR:
haes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LO767_09875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Motif
Other DBs
NCBI-ProteinID:
UGV29344
LinkDB
All DBs
Position
complement(2161233..2163362)
Genome browser
AA seq
709 aa
AA seq
DB search
MREQALQQLRNVFGYGEFRGQQADIIDQVACGGDALVLMPTGGGKSLCYQVPGLLREGLT
VVVSPLIALMDDQVATLNELGLTAAALNSTLSEDAQREVARQMRAGELQFLYLAPERLLK
PRTLNFLQSLPIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPGVPRMALTATADERT
REEMVQRLKLEQAACFVSGFDRPNIFYRIVPKDKPRQQLLGFLREHKGDAGIVYCLSRKK
VEETAAWLCEQGWPALPYHAGLPQELRSTHQRRFLNEEGLVMVATIAFGMGIDKSNVRFV
AHLDLPKSVEAYYQETGRAGRDGLAADAWMAYGLQDVLMLNQIMAGSEGDERHKRIERHK
LDAMLALCELTTCRRQTLLGYFGETLEQPCGNCDNCQEPVSTWDGSEAARMALSTIYRSG
QRYGVGHLIDILLGRVNEKIRSAGHQHLSTYGIGKSLGENEWRSVFRQLIALALVEVDLD
GYGSLRLSERCRPLLRGEQSLQLRRDVSKPAAWGSRGSNKPVIAEADRALWESLRTLRKQ
LADAHGVPPYVIFTDNTLVDMLRQRPTTLQDMALVSGVGSHKLERYGADFIQVLAGDGAA
AQAQETRDAHEAIAMVRAGMSPEQAAMQLGQPLRKVYGQLAQAITTGNLTLEQAIDIGPA
QLERLQDAFLNFDGEDLPGVRTLARELDEPVDEGVLHCIRAALVLEISG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagcaagcactgcagcaactcaggaacgtgtttggctacggcgaattccgtggt
cagcaagcggatatcattgatcaggtggcctgtggcggcgatgcgctggtcttgatgccg
accggtggtggcaagtcactgtgctatcaggtgcccgggctgctgcgtgaggggctgaca
gtggtggtttcgccgctgatcgcgttgatggacgatcaggtcgcgacgctgaacgagctg
gggttgacggcggcggcgctcaattccacgttgagcgaagacgcccagcgcgaggtggcc
cggcagatgcgcgccggtgagctgcagtttctctatctggccccggagcgtctgctcaaa
ccccgtactctgaattttctgcagtctttgccgattgccctgtttgcgattgacgaggcg
cactgtgtttcccagtgggggcacgattttcgccccgagtatctgcagctgggtcagttg
gcagagctgttccccggcgtgccgcgcatggcgctgaccgccacggcggatgaacgtacc
cgcgaagagatggtccagaggctgaaactggagcaggctgcctgctttgtttccggcttt
gatcgccccaatattttttatcgcatcgtgcccaaggataagccccgtcagcagttgctc
ggttttctgcgcgagcacaagggggacgccggcattgtctattgcctgtcgcgcaagaag
gtagaagaaaccgccgcctggctgtgcgagcagggctggcctgccttgccctatcatgcg
ggcttgccgcaggagttgcgctccacgcatcagcgccgcttcctaaatgaggaggggctg
gtaatggtcgcgaccatcgccttcggtatgggtatcgacaagtccaatgtgcgctttgtc
gctcatctggatctgcccaagagtgtcgaggcctactaccaggaaaccggtcgtgccggc
cgtgatggtctggctgccgacgcctggatggcctacggcctgcaggatgtgctgatgctc
aatcagatcatggccggctcggaaggtgacgagcgccataaacgcattgagcggcacaag
cttgacgccatgctggccctctgcgaactgactacctgtcgccggcagacgctgctgggc
tacttcggtgaaaccctggagcaaccctgcggtaactgtgacaactgccaggagccggtt
tcgacctgggacggcagtgaggcggcgcggatggcgctgtcgacgatctatagaagcggt
cagcgttatggcgtgggtcacctgatcgacattctgctcggtcgcgttaacgagaagatt
cgcagcgccggtcatcagcacctttctacctacgggattggcaagtcactgggtgagaat
gaatggcgctcggtgttccgccagttgatcgccctggctctggtcgaggtggatctcgat
ggctatggcagcctgcgcctgagcgaacgctgtcgtccgctgctgcgtggcgagcagagc
ctgcagctgcgccgtgatgtcagcaagccggcagcctggggcagccggggcagcaacaag
ccggtgattgccgaggctgatcgcgccctctgggagtcgttgcgcaccctgcgcaaacag
ctggcggacgctcacggtgtgccgccctacgtcatcttcaccgacaatacgctggtcgat
atgctgcgtcagcggccgactaccctgcaggatatggcactggtcagtggcgtcggttcg
cacaagcttgagcgctatggcgctgattttattcaggttctggccggtgatggagcggcg
gcacaggctcaggagacccgtgatgcccatgaggcgattgccatggtgcgcgccggaatg
agcccggaacaggcagccatgcagctggggcaaccgcttcgcaaggtctacggtcagctg
gcgcaggcgattaccaccggcaacctgaccctggagcaggccatcgacatcggacccgct
cagcttgagcggttgcaggatgcctttctcaatttcgacggcgaggatctgcccggcgta
agaaccctggcgcgtgagctggacgagccggttgacgaaggggtgttgcactgcatccgt
gccgcactggtgctggaaatcagcggctag
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