Halopseudomonas aestusnigri: LO767_10680
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Entry
LO767_10680 CDS
T07924
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haes03016
]
LO767_10680 (truD)
Enzymes [BR:
haes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LO767_10680 (truD)
Transfer RNA biogenesis [BR:
haes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LO767_10680 (truD)
Prokaryotic type
LO767_10680 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF3040
Motif
Other DBs
NCBI-ProteinID:
UGV29488
LinkDB
All DBs
Position
complement(2340852..2341907)
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AA seq
351 aa
AA seq
DB search
MSETLLGPRAWGDSCGRATLKATPDDFRVTEVLDIALSGSGEHLWLLLEKRGLNTEEVAR
QLARAAGISLRNVSYAGLKDRQAVTRQWFSLQLPGRADPDFSALWNDQLRCLEQARHQRK
LQRGAHSANGFFIRLTDLVADQSQLEERLQIVAAQGVPNYFGPQRFGRDGSNLYDARRWA
GQGGYPPARGTRSRLLSTARSLLFNRMLARRVTDGSWNRILEGDCLAFTNSRSQFPASEL
AADDPRPAALDLHPTASLWGSGELASTGATAQLEQQVAAAEPELAAWLERAGLEQARRIL
RLPIQGLTWHYPSTDCLELEFTLPTGCFATALLHELLELSSVPGGGLETEN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagacgctgctggggccgcgcgcctggggtgacagttgcggtcgggcaacgctg
aaggcaacgcctgacgatttccgcgtcaccgaagtgctggacatcgcactcagtgggtca
ggagagcacctctggttgctgctggagaagcgcggcctgaataccgaagaagtcgccagg
cagctggcccgcgcggccggtatttcgctgcgtaacgtcagctacgccgggttgaaggac
cgtcaggcagtaacccgtcagtggttcagcttgcaactgccggggcgcgccgatccggat
ttcagcgcgctctggaacgatcaactgcgttgtctcgagcaggcgcgccatcagcgcaag
ctgcagcgcggcgctcacagtgccaacgggttctttattcgcctcactgacctggttgcc
gatcagtcgcagctggaagagcggctgcagattgtcgccgctcagggtgtacccaactat
ttcggcccgcagcgcttcggccgcgacggcagcaatctgtacgatgcccgccgttgggcc
gggcagggcggctacccgccggctcgcggaacacgctcgcggctgctgtcgacggcgcgc
agtctgctgttcaatcggatgctcgccaggcgggtgaccgatggcagctggaaccgcatt
ctggaaggcgactgcctggcctttaccaacagtcgaagtcagtttccggccagtgaactg
gctgctgacgaccctcgcccggcggcgctggacctgcacccaaccgcctcgctttggggg
agcggtgagctggccagtaccggcgccacggcgcagcttgagcagcaggttgcggcggca
gaaccggaactggccgcctggctcgaacgggctggtctggagcaggcgagacggatttta
cgcctccccattcaggggcttacgtggcattatccgtccaccgattgtctcgaactggaa
tttaccctgcctaccggctgcttcgccacggcgttgctgcacgagctgctggaactctcc
agtgttcccggtggcgggctggaaacggaaaactga
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