Halopseudomonas aestusnigri: LO767_12350
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Entry
LO767_12350 CDS
T07924
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haes03036
]
LO767_12350 (xerD)
Chromosome and associated proteins [BR:
haes03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LO767_12350 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
MrpR_C_cat
TP_0584_N
Motif
Other DBs
NCBI-ProteinID:
UGV29794
LinkDB
All DBs
Position
complement(2690776..2691696)
Genome browser
AA seq
306 aa
AA seq
DB search
MPDVAPMPVSDADQQLIDQFLDSLWLEKGLSKHTCSAYRTDLRTLAGWLGQRRSRLLQLS
RADLMAHLGWRLGAGYQVRSSARLLSCVRSFYRYLLRQQLITDDPTRDVAMPKIGRPLPK
SLSEADVERLLSAPDSEDSLGLRDRCMLEVLYATGLRVSELVGLRLDQLNLRQGVVRVTG
KGSKERLVPLGEEAMRWLEQYLDTARAALLAGKPSDVLFPSRLGQMMTRQTFWHRVKLHA
LTAGIRSELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARQRLHDLHA
QHHPRG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgttgcgccgatgccggtcagtgacgcggatcagcagctgatcgatcaattc
cttgacagtctgtggctggaaaaggggttgtcgaagcatacctgcagcgcctatcgcacc
gatctgcgtacgctggccggttggctggggcagcgtcgcagccggctgctgcagctgtcg
cgcgccgatctgatggcgcacctgggctggcggcttggcgccggctatcaggtgcgttcc
agtgcccggctgctgtcctgtgtacgaagtttctaccgctacttgctgcgccagcagttg
atcactgacgacccgacccgggatgttgccatgccaaagatcggcaggccgctgcccaag
tcgctcagtgaggccgacgttgagcgcctgctgtccgctccggacagcgaagacagcctg
gggttgcgggaccgttgcatgctggaagtgctgtatgccaccggattgcgggtcagtgag
ctggtcggcttgcggctcgatcagttgaacctgcgtcagggtgtggtgcgggtgactggc
aagggcagcaaggaacgtctggtccctttgggggaagaggcgatgcgctggctggagcaa
tatcttgatacggcccgtgcggcactattggcaggcaagccgagtgatgtactgtttccc
agcaggctggggcagatgatgacgcgtcagacattctggcacagagtcaagctgcatgct
ctgacggccggcattcgcagcgaactgtctccgcacaccctgcgccacgcctttgctacc
catctgctcaatcacggggcggacctgcgggtggtgcagatgctgctggggcacagtgat
ctgtcgacaacccagatctatacccatattgcccggcagcgcctgcatgatctgcatgcc
cagcatcatccccgagggtga
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