Halopseudomonas aestusnigri: LO767_12375
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Entry
LO767_12375 CDS
T07924
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes02024
Quorum sensing
haes03060
Protein export
haes03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LO767_12375 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LO767_12375 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LO767_12375 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
haes02044
]
LO767_12375 (ffh)
Enzymes [BR:
haes01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LO767_12375 (ffh)
Secretion system [BR:
haes02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LO767_12375 (ffh)
Eukaryotic Sec-SRP protein
LO767_12375 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
cobW
AAA_33
YqeC
AAA_16
AAA_26
AAA_30
APS_kinase
DnaB_C
AAA_31
AAA_14
AAA_19
ABC_tran
KTI12
VirC1
AAA_24
ParA
T2SSE
NACHT
SLFN-g3_helicase
TsaE
Thymidylate_kin
AAA_17
DO-GTPase1
Rad17
ArsA_ATPase
AAA_28
nSTAND3
ATPase
cas_Cpf1_2nd
ResIII
Motif
Other DBs
NCBI-ProteinID:
UGV29798
LinkDB
All DBs
Position
complement(2693921..2695318)
Genome browser
AA seq
465 aa
AA seq
DB search
MFENLTERLSHSLRGVTGQAKLTEDNIKDTLREVRMALLEADVALPVVKTFVDQVRERAV
GTEVSRSLSPGQVFVKIVKSELEAVMGQSEGLNLAVSPPAVILMAGLQGAGKTTSVAKLA
KTLREREKKKVMVVSADVYRPAAIKQLETLAADVQVEFFPSSADQQPVAIVEAAMREAKN
RFMDVLIVDTAGRLHVDDEMMAEIRQVHAAAKPAETLFVVDAMTGQDAANTAQAFNEALP
LTGVILTKVDGDARGGAALSVRHITGKPIKFLGMGEKIDALEVFHPDRVASRILGMGDVL
SLIEQAEQKIDKDKAEKLAKKLKKGKGFDLEDFRDQLQQMNAMGGLGSMMEKLPMMGGKI
SAAQMETAQTEAAKQFKRMEAIINSMTPAERRNPDLISGSRKRRIAAGSGTQIQDIGRLL
KQHKQMQKMMKKVTGKGGMAKLMRGMGGMGGGGGMLPPGGGMPRF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaatcttaccgagcgcctgtcgcacagtctgcgcggtgtgacaggtcaggcc
aagctgactgaagacaacatcaaggacaccctgcgcgaagtgcgcatggcgctgctggag
gctgatgtcgcgctgccggtagtcaagaccttcgttgaccaggtgcgtgagcgcgcggtc
ggcaccgaagtgtcgcgcagcctgtcgccggggcaggtcttcgtcaagatcgtcaagtcc
gagctggaagcggtcatggggcagtccgaagggctgaacctggcggtcagcccgccagcg
gtgatcctgatggccggtctgcagggcgcgggtaagaccaccagcgtggccaagctggcc
aagacgctgcgtgagcgcgaaaagaagaaggtcatggtggtcagcgccgacgtctaccgt
ccggcggcgatcaaacagctggaaacgctggcagccgacgtacaggtcgagttcttcccg
tcctccgctgatcagcagccggtcgccatcgtcgaggcggcgatgcgtgaggcgaagaac
cgcttcatggacgtgctgatcgtcgataccgctggccgtctgcacgtcgacgacgagatg
atggccgagatcaggcaggtgcacgcggcagccaagccggcggaaaccctgtttgtggtc
gacgccatgaccggtcaggatgcggccaacaccgctcaggccttcaacgaggcgctgccg
ctgaccggtgtcatcctgaccaaggtcgacggtgatgcccgtggcggtgcggcgctgtcg
gtgcgtcatatcaccggcaagccgatcaagtttctcggtatgggcgagaagatcgacgcc
ctggaagtcttccaccccgaccgggtcgcctcgcgcatcctcggtatgggtgacgtgctc
agcctgatcgagcaggccgagcagaagatcgacaaggacaaggccgagaaactggccaag
aagctgaagaagggcaagggctttgatcttgaggacttccgtgatcagctgcagcagatg
aacgccatgggcgggctcggctcgatgatggaaaagctgccgatgatgggcggcaagatc
agtgctgcgcagatggaaaccgcgcagaccgaggcggccaagcagttcaagcgcatggag
gcgatcatcaattcgatgacgccggccgagcgccgtaatccggacctcatcagcggctcg
cgcaagcgccgtatcgcggcgggctcgggtacccagattcaggacatcgggcgcctgctc
aagcaacacaagcagatgcagaagatgatgaagaaggtcaccggcaagggcggtatggcc
aagctgatgcgcggtatgggtggcatgggtggtggcggtggcatgctgcccccgggtggc
gggatgccacggttctga
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