Halopseudomonas aestusnigri: LO767_13020
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Entry
LO767_13020 CDS
T07924
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haes03400
]
LO767_13020 (phrB)
Enzymes [BR:
haes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LO767_13020 (phrB)
DNA repair and recombination proteins [BR:
haes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LO767_13020 (phrB)
Prokaryotic type
LO767_13020 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UGV32735
LinkDB
All DBs
Position
2821683..2823104
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AA seq
473 aa
AA seq
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MQLCWLRADLRITDNQALWHASQSGPAVAVFIVTANDWRAHDDAPVKIDFWRRNLQALTD
ELSQRHIPLQILHADAWSDCPTLLLELARKTGASALHFNDEYGIHEQRRDDAVSEAFAAA
GLTCQRYTDQLLFAPGSLTTQSGGMYKVYSQFRRQAYTRLHQQLPSLLPAPAKQAQLALR
ASSVPEQFGDFAPAEPALQQRWPAGERAAAERLQLFCNQLIDDYAEDRNRPDLDATSRLS
PYLVAGVLSPRQCLHAALQANGGEFDTGSSGAVSWINELLWREFYKHILVCYPHVSRHRA
FKPETENVAWRDDPHGLAAWKEGRTGIPLVDAAMRQLLATGWMHNRLRMVSAMFLTKNLL
IDWREGERWFMQHLIDGDLAANNGGWQWSASTGTDAAPYFRVFNPVSQSEKFDPDGSFIR
EWVPELAHLPASQIHLPPAADLFSATAYPRPIVDLRSSRQRAIDAFRNAGEMA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ctgcaactgtgctggctccgcgccgacttgcgcattaccgacaaccaggcgctctggcat
gccagtcagagcggaccggcagtggcggtttttatcgtcaccgccaacgactggcgagcc
cacgatgatgcacccgtcaagatcgacttctggcgccgcaacctgcaggcgctgaccgat
gagctgtcacaacggcacataccactgcagattctgcatgccgacgcctggagcgactgc
ccgacactgctgctggagctggcccgcaagaccggtgccagcgccctgcacttcaatgat
gagtacggtattcacgaacagcggcgtgacgacgccgtcagcgaggcctttgccgctgcc
ggcctgacctgtcagcgctataccgaccaactgctgttcgcgccgggcagtctgaccact
caaagtggcggcatgtacaaggtctacagccagttccgtcgtcaggcctacacccgactg
caccagcaactgcccagcctgctgccggcacccgccaagcaagcgcagctggcgttgcgg
gcttcgtctgttcccgaacaattcggcgactttgcccctgccgaacccgcactgcagcaa
cgctggccggctggcgagcgggctgcagcagagcgcctgcagctgttctgcaatcagctc
atcgacgactacgcagaagatcgcaaccgtcccgatctggacgccaccagccggttgtcg
ccctatctggtcgctggcgtactgtcgccccgtcagtgcctgcacgctgcgctgcaggcc
aacggaggcgagttcgacacaggcagcagtggtgccgtgagctggatcaacgaactgctc
tggcgtgagttctacaaacacattctggtgtgctatccgcacgtttcgcgccaccgcgcg
ttcaagccggagaccgaaaacgtcgcctggcgcgacgatccgcacggcctggccgcttgg
aaagaaggccgaaccggtattccgctggtcgatgcggccatgcgccagttgcttgccacc
ggctggatgcacaaccgactgcgcatggtcagcgccatgttcctgaccaagaatctgctg
atcgactggcgcgaaggcgagcgctggttcatgcagcacctgatcgacggcgacctcgcc
gccaataacggcggctggcagtggagcgcatcgaccggcaccgacgcggccccctacttc
agggtgttcaatccggtcagccagtccgagaagttcgatcccgatggcagcttcatccgt
gaatgggtcccggagctggcgcacctgccagccagccagatccacctgccacccgccgct
gacctgttttccgccactgcctatccgcgtccgattgtggacctgcgcagcagccgccag
cgcgcaatcgacgccttccgcaatgcaggagagatggcatga
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