Halopseudomonas aestusnigri: LO767_13495
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Entry
LO767_13495 CDS
T07924
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haes03016
]
LO767_13495 (truB)
Enzymes [BR:
haes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LO767_13495 (truB)
Transfer RNA biogenesis [BR:
haes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LO767_13495 (truB)
Prokaryotic type
LO767_13495 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UGV30000
LinkDB
All DBs
Position
complement(2922474..2923394)
Genome browser
AA seq
306 aa
AA seq
DB search
MAGAKSKRRSIDGILIFDKPLGMSSNAALQKVRWLFNANKGGHTGSLDPLATGVLPLCLG
EATKFSQYLLDADKAYVTEARLGMTTATGDAEGDVLEIKPFNVTLADVEALLPRFTGEID
QVPPMYSALKHEGQPLYKLARAGETIERKARTITISQLKVLGLEGDRLQLEVHCSKGTYI
RSLVEDIGAALGCGAHVSALRRIKAGPFDLSQSVTLEALEALHAEGGAEALDHLLLPMDS
GLEDWPVLELTEQTAYYLNHGQAVRVPGSPAFGKVRLRDASGRFLGIGEMTDDARVAPKR
LLRFEA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggagcgaagagcaagcgccgttccattgacggcatcctgattttcgacaagccg
ctgggcatgagctccaacgcggccctgcagaaggtgcgctggctgttcaacgccaacaag
ggtggtcacaccggcagccttgatccgctggcgaccggcgtgctgccgctgtgcctgggt
gaggcaaccaagttttcccagtacctgctggacgccgacaaggcgtatgtcaccgaggcg
cgtctgggtatgaccaccgccaccggtgacgccgagggcgatgtgctggagatcaagccg
ttcaacgtgacgctggctgacgtcgaggcactgctgccgcgctttaccggtgagatcgat
caggtgccgccgatgtactcggcgctcaagcatgaggggcagccgctttacaagctggcc
cgtgccggcgaaaccatcgagcgcaaggcgcgtaccatcaccatcagtcaactgaaggtg
ctgggcctggaaggcgatcgtctgcagctggaagtgcactgcagcaaggggacgtacatc
cgcagcctggtcgaggacatcggcgctgcgctgggctgtggcgcgcatgtgtcagcgctg
cgccggatcaaggccgggccgtttgatttgtcccaatcggttaccctggaggcgcttgag
gcgctgcacgccgagggtggcgccgaggcgcttgatcatctgctgctgccgatggatagc
gggctggaagactggccggtcctggagttgaccgagcagaccgcctactacctgaatcac
ggacaggcggtacgcgtaccgggtagtccggcgtttggcaaggtgcgcctgcgcgatgcc
agtggccgctttctcggtatcggcgaaatgaccgacgatgctcgggttgcgcccaagcgg
ttgttgcgcttcgaggcgtga
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