Halopseudomonas aestusnigri: LO767_14170
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Entry
LO767_14170 CDS
T07924
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes03030
DNA replication
haes03430
Mismatch repair
haes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LO767_14170
03430 Mismatch repair
LO767_14170
03440 Homologous recombination
LO767_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haes03032
]
LO767_14170
03400 DNA repair and recombination proteins [BR:
haes03400
]
LO767_14170
Enzymes [BR:
haes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LO767_14170
DNA replication proteins [BR:
haes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LO767_14170
DNA repair and recombination proteins [BR:
haes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LO767_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UGV30110
LinkDB
All DBs
Position
3060143..3060880
Genome browser
AA seq
245 aa
AA seq
DB search
MIRFNPAANAVDTRTPEWPTELARLAERSSQPGLQAYYRAGCPAGDTPLEEVPLAALDIE
TTGLDARRDAIVSIGLMPFNLQRIRCREAFYEVVKPDIPLSEESITYHRITHSDIRQASD
PASTLNRLLGAMAGRIMVVHYRALERAFLDRAARQYLGEPLFFPVIDTMQLEARMHRGSA
QPGWLARLFGREIESIRLADSRQRYGLPHYHAHHALTDALATAELLQAQVLTHYRPDTPL
RELWY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttcaaccccgccgccaacgccgtcgacacgcgcacgcctgagtggccgacc
gagctggccagactggccgaacgcagcagccagcccggcttgcaggcgtactaccgcgcc
ggctgccctgctggtgacacgccgctggaagaggtgccgctggcggcactggatatcgaa
accactggcctggatgcacgccgtgatgccatcgtcagcatcggactgatgcccttcaac
ctgcagcgtatccgctgtcgcgaggccttctacgaggtggtaaaacccgacattccgctg
agcgaagagtcaatcacctaccaccgcatcacccactctgatattcgccaggcgtcagac
cctgccagcaccctgaaccgcctgctgggggccatggccgggcgcatcatggtggttcac
taccgggcactggaacgcgcctttcttgatcgagctgcccgtcagtatctgggtgagccg
ctgtttttcccggttattgataccatgcagctcgaagcccgaatgcaccgcggcagcgcc
cagcccggatggctggcccgcctgttcggacgcgagatcgaatccatccgcctggcagac
agccgccagcgctacggtctgccgcactaccacgcccaccacgcgctgaccgatgcgctg
gcgaccgctgagctgctgcaggcgcaggtactgacccactatcggccagacaccccgcta
cgcgaactctggtattga
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