Halopseudomonas aestusnigri: LO767_14240
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Entry
LO767_14240 CDS
T07924
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LO767_14240 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haes03400
]
LO767_14240 (recC)
Enzymes [BR:
haes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LO767_14240 (recC)
DNA repair and recombination proteins [BR:
haes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LO767_14240 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UGV30122
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All DBs
Position
complement(3076513..3079995)
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AA seq
1160 aa
AA seq
DB search
MQDANSLAPGLMIIHGNRLETLRELAVDWMRAHPLAPLENEVILVQSNGIAQWLQMALAA
DPAQGGCGIAAALDVQLPARFLWDSYRGVLGRDSVPEQSPLDKLPLTWRLMRLLPALQDQ
PDFAPLKRFLADDHDCRKRYQLAVRLADLFDQYQVYRADWLNDWAAGRDHIGLARTGARP
LDDEERWQPALWRAVLADVGAERLSDSRAGIHPRFVQHLLDCDSPPASLPRRVIVFGISS
LPAQTLEALAVIGRFSQVLLCVLNPCEYHWGDIVADQDLLRHQYRRQQRRPGTPLQLDEN
TLHQHAHPLLAAWGKQGRDYINLLDQHDERASYEARFAAIAGGRVDLFEAPAGNTLLQQL
QQDILHLRPLAESRALWPAVDPVRDQSIRFHLAHSPQREVEVLHDQLLAAFAADPNLKPR
DIIVMVPDVNLYAPHIQAVFGQHSGDDPRAIPFTLADQGQRGQEPLLIALEHLLRLPDSR
LPVSEVLDLLDVPALRSRFGLSETDLPTLQRWIEGAGIRWGLDQQRRAALGLPDGLEANS
WRFGLRRMLLGYASGGAEAWQQIEPYDEIGGLDAALIGPLSGLLDALDRHETRLANATVP
SEWGERLRQLLDDFFIAESDRDQLLLAQLHEGLADWLELCDGVALDVALPLNVVAEAWLD
GVGQSQLSQRFLAGAVNVCTLMPMRAIPFKRICLLGMNDGDYPRAQPPLDFDLMGKDYRP
GDRSRREDDRYLLLEALLSARDALHISWVGRSIRDNSERPPSVLIGQLRDHLAAGWHTAD
GADLLHALTVEHPLQPFSRAYFSADSALFSYASEWRQLHDSRAGDDADQPLAPVTLEAPI
ELLALQRFLRNPVEHFFAARLKVWLQEQHSTSEDDEPFALDGLQRHQLSQWLLEQVQQAD
LQDDWQALLLEQASRLQQRGSLPLAGFGELTLAQLVAPLGAQLERFREQLLLWDQPLENP
LLLQAVASTPDATIEVVSWLAGVRRCAPLDGLMRVQLVTGSLLGKKGALRWRKLLGELCQ
HVLAAASGHRLTTCLIGADASIQLLPLEQERAASIVRDWLLGYLHGLSRPLPVAVETAFA
WLTEGKDEKRLGAARLCYEGNDFSRGEVDGSPALQRSYPDFASLQANDEFIGWAESLYQP
LAQAIEDEWLMITQASEDQA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgccaacagcctcgcccccggtttgatgatcatccacggcaaccgcctggag
acccttcgcgagctggcggtggactggatgcgggcgcacccgctggcgccgctggaaaac
gaagtcatcctggtgcagagcaacggcattgcccagtggctgcagatggcgctggcggca
gaccctgcgcagggcggctgcggcattgcggcggcgctggatgtgcagttgccggcgcgc
tttctctgggacagctaccgtggcgtgctgggccgcgacagcgtgcccgagcaatccccg
ctggataaactgccgctgacctggcggctgatgcgcttgctgcccgcgctgcaggatcag
cctgattttgcgccgctcaaacgctttctcgccgatgaccacgactgccgcaagcgctac
caactggcggtgcggctggccgacctgttcgaccagtatcaggtttaccgcgccgactgg
ctgaacgactgggccgccgggcgtgaccatattggcctggcgcgcaccggcgcgcgaccg
ctggatgacgaggagcgctggcagccggcgctctggcgcgcggtgctggcggacgtgggg
gctgagcgcctgagcgacagccgggctggtatccatccgcgttttgttcagcacctgctc
gactgtgacagcccaccggccagcctgccgcgacgggtgatcgtctttggtatctcatcg
ctacccgcgcagacgctcgaggcgttggcggtgatcgggcgtttttctcaggtactgctt
tgcgtgcttaacccctgcgagtaccactggggcgatatcgttgccgatcaggacctgctg
cgccaccaataccgccgtcagcaacggcggccgggcacgcccctgcagttggacgagaac
accctgcaccagcacgctcatccgctgctggccgcctggggcaagcagggccgtgactac
atcaacctgctcgatcagcacgatgagcgcgccagttacgaagcgcgctttgccgctatc
gccggtggccgggttgacctgtttgaagcgcccgccggcaacacgctgctgcagcaactg
caacaggacattctgcacctgcggccgctggccgagtcccgcgcattgtggccagcggtc
gacccggtgcgtgatcagtccatccgctttcatctggcgcacagcccgcagcgcgaggtg
gaagtactgcacgatcagctgctcgccgcctttgctgccgacccaaacctcaagccgcgc
gacatcatcgtcatggtgcccgacgtcaatctctacgcaccgcacattcaggcagtgttc
ggccagcacagcggtgacgacccgcgggcgattccctttaccctggccgatcagggtcag
cgcggtcaggaaccgctgttgattgcactggaacatctgctgcgcctgcccgacagccga
ctgccggtcagcgaagtgctggacctgctggacgtaccggcgctgcgcagccgctttggc
ctcagtgagaccgacctgccgaccctgcaacgctggatcgagggcgcaggcatccgctgg
gggctggatcagcagcgccgcgccgctctgggtttgccagacgggctggaagccaatagc
tggcgtttcggcctgcgccggatgctgctgggttacgccagcggcggtgccgaggcctgg
cagcagatcgaaccctatgacgagattggcgggctggacgcggcgctgatcggcccgctc
agcggcctgctggatgcactggaccgccacgaaacgcggctggccaatgcgaccgtgccg
agtgaatggggcgaacgcctgcgccagctgctggatgacttctttatcgccgagagtgat
cgggatcaactgctgctggcgcagctgcacgaggggctggccgactggctggagctgtgt
gacggcgtcgcgctggacgtggcactgccgctcaacgtggtggccgaggcctggctcgat
ggtgtcggccagagccagctcagccagcgttttctcgccggggcggtcaacgtctgcacg
ctgatgccgatgcgcgccattccgttcaagcgcatctgcctgctgggcatgaatgatggc
gactacccgcgcgcgcagccaccgctggactttgatctgatgggcaaggactaccggccg
ggcgaccgctcgcgccgcgaggacgaccgttatctgctgctggaggcgctgctgtcggcg
cgcgacgccctgcatatcagctgggtcgggcgcagtatccgcgacaacagcgaacggccg
ccgtcggtgctgatcgggcagctgcgcgatcatctggccgccggctggcacacggctgat
ggcgctgatctgttgcacgcgctgaccgtcgagcatccgttgcagccgttcagtcgcgcc
tatttcagcgccgattccgcgttgttcagttacgccagcgagtggcgtcagctgcacgac
tcccgtgctggcgatgatgcagaccagccgctggcgccggtcacgctggaagcgcccatc
gagctgctggcgctgcagcgctttctgcgtaacccggttgagcacttttttgccgctcgg
ctgaaggtctggctgcaggagcagcacagcaccagcgaagacgacgaaccctttgcactc
gatggcctgcaacggcaccagctcagtcagtggctgctggaacaggtgcagcaggccgat
ttgcaggatgactggcaggccctgctgcttgagcaggccagccgcctgcagcagcgcggc
agcttgccgctggccgggttcggtgagctgaccctggcgcaactggttgcgcccctgggc
gcacagcttgagcgcttccgtgagcaactgctgttgtgggatcagccgctggaaaatccg
ttgctgctgcaggcggtggcgagcacaccggacgccactatcgaagtggtcagctggctt
gccggcgtgcgccgctgtgctccgttggacggcctgatgcgggtgcagctggtgaccggc
agcctgctcggtaaaaagggcgcgttgcgctggcgcaagttgctgggcgagttgtgccag
cacgtgctggctgcggcctctggtcaccggctcacgacctgtctgatcggtgccgacgcc
agcattcagctgctgccgctggagcaagaacgcgccgccagtatcgtgcgcgattggttg
ctggggtatctgcacggcctgagccgaccgttgccggtggcggtagaaaccgccttcgcc
tggctgaccgagggcaaggacgaaaagcgcctcggtgccgcgcggctctgctacgagggc
aacgacttcagtcgcggcgaggtcgacggcagcccggcgctgcagcgcagctatcccgac
tttgccagcctgcaggcgaacgacgaatttattggctgggcagagtcactgtatcaaccg
ctggcgcaggcgattgaggatgaatggctgatgattacgcaggcatcggaggaccaggca
tga
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