Halopseudomonas aestusnigri: LO767_15525
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Entry
LO767_15525 CDS
T07924
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
haes
Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haes03021
]
LO767_15525 (rpoH)
Transcription machinery [BR:
haes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LO767_15525 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UGV30347
LinkDB
All DBs
Position
complement(3330350..3331213)
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AA seq
287 aa
AA seq
DB search
MSTALQPVHTLAPGANLEAYIQSVSAIPILSAEEERVLADRLYYHEDLEAARQLVMSHLR
FVVHIARSYSGYGLAQADLVQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSAKKKLAWLSQNEVEAVAADLGVAEREVREMESRLYGQD
LGFDGAQDDDDDAAYAPVHYLEDKRYDPATQLESADWSDSASTSLLTGLEALDERSRDIL
YQRWLAEEKATLHELAAKYQVSAERIRQLEKNAMNKLKKNLEAEVEV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcattgcagcctgttcataccttggctccgggagccaatctcgaagcctac
attcaaagcgtcagcgccattccgattctcagtgcggaagaggagcgggtgctggctgat
cgcctgtactaccacgaagacctggaagctgcccgtcagctggtcatgtctcacctgcgt
tttgtcgtgcacatcgcccgcagctattccggttacggtctggcgcaggccgatctggtg
caggaaggcaacgttggtctgatgaaggcggtcaagcgtttcaatccggagatgggcgtg
cgcctggtctccttcgcggtgcactggattcgcgccgagattcacgagttcatcctgcgc
aactggcggatcgtcaaggtcgcaaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagcgccaagaagaagctggcctggctgtcgcagaatgaagtcgaggcggttgctgcc
gacctgggtgttgccgagcgtgaagtccgcgagatggaaagccgtctgtacggtcaggac
cttggctttgacggcgcgcaggacgatgacgacgatgcggcctacgcaccggtgcattat
ctggaagacaagcgctatgacccggctacccagctcgagtcagccgactggtccgatagt
gccagcaccagcctgctgaccggtctggaggcgctggacgagcgcagtcgcgacattctc
taccagcgctggctggccgaagagaaggccacgctgcacgagctggcagccaagtatcag
gtctctgccgagcgtattcgtcagctggaaaagaacgccatgaacaagttgaagaagaac
ctcgaagccgaggttgaagtctga
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