Halopseudomonas aestusnigri: LO767_16175
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Entry
LO767_16175 CDS
T07924
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes03420
Nucleotide excision repair
haes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LO767_16175 (uvrD)
03430 Mismatch repair
LO767_16175 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haes03400
]
LO767_16175 (uvrD)
Enzymes [BR:
haes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LO767_16175 (uvrD)
DNA repair and recombination proteins [BR:
haes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LO767_16175 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LO767_16175 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
AAA_22
DUF6658
SseB_C
GA
Motif
Other DBs
NCBI-ProteinID:
UGV30472
LinkDB
All DBs
Position
complement(3467855..3470029)
Genome browser
AA seq
724 aa
AA seq
DB search
MDISHLLNSLNDAQRQAVTAAVGQQLVLAGAGSGKTRVLVHRIAWLVQVEQASPWSILSV
TFTNKAAYEMRARIEQLLGIAPQGMWVGTFHGLAHRLLRAHWREAGLAEQFQILDSDDQQ
RLVKRVIRELGLDENQWAPKQAQWWINAQKDEGLRPQNIQPAGDLYLSTMVRIYEAYEQA
CNRAGAVDFAELLLRSLELWRDNPALREQYRARFKHILVDEFQDTNAVQYAWLRHLAGKT
PSLMVVGDDDQSIYGWRGARIENIQQFQTDYPNAEMIRLEQNYRSTATILKAANALIGNN
SGRLGKELWTDGNEGEPIALYAGFNEQDEARFIVERIEQGIRDGLARSEMAILYRSNAQS
RVLEEALLRSGIPYRIYGGQRFFERAEIKNAMAYLRLMANRGDDGALERIINLPTRGIGD
KTVELLRQQARERDVSMWQAACDLIDNKGLPGRAANAVQGFLVLIEEMAERAEGLPLYSQ
TQIAIEHSGLLRFHEQEKGDKAQARVENLEELVSAARGFENDMADEEEEGDVLLAFLAHA
SLEAGETQADRFEDSVQLMTLHSAKGLEFPLVFMAGVEEGLFPHKMSLEDPGRLEEERRL
AYVGITRAMQQLVITWAETRRLYGSETFNKVSRFVREIPPELIREVRLGSQVSRPFGPAK
GNLFASEATESTGFALGQRVEHALFGEGVVLNYEGHGAQARIQVNFDDEGSKWLMVAYAK
LQAL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcccacctgcttaattcgctcaatgatgctcaacgtcaggccgtgactgcc
gcggtcggccaacagctggtgctggccggcgccggctccggcaagacccgggtactggtt
caccgtatcgcctggctggtgcaggtcgaacaggcctcaccctggagcattctttccgtc
acctttaccaacaaggccgcctacgaaatgcgcgcgcggatcgagcaactgctcggtatt
gcgccgcagggcatgtgggtcggcacctttcacggcctggcacatcgactgctgcgcgcg
cactggcgcgaggccgggctggccgaacagttccagattctcgacagcgacgaccagcag
cggctggtcaagcgggttatccgtgaactcggtctggacgagaaccagtgggcgcccaag
caggcccagtggtggatcaacgcccagaaggacgaaggcctgcgtccgcagaatattcag
ccggccggtgatctgtacctgagtaccatggtgcgcatctacgaagcctatgagcaggcc
tgcaatcgtgccggggccgtcgacttcgccgagctgctgctgcgttcgctggaactgtgg
cgcgataatccggcgctgcgcgagcagtatcgggcgcgcttcaagcacattctggtcgac
gagttccaggacaccaacgcggtgcagtacgcctggctgcgccatctcgcgggcaagaca
cccagcctgatggtggtcggtgacgatgaccagtcaatctatggctggcgcggcgcgcgg
atcgaaaacatccagcagttccagaccgactatccgaatgccgaaatgatccgtctggag
cagaactaccgctccaccgcgaccattctcaaggccgccaacgcgctgatcggcaacaac
tcggggcggctcggcaaggagctgtggaccgacggcaacgaaggcgagccgattgccctg
tacgccggcttcaacgagcaggatgaagcgcgttttatcgtcgaacggatcgagcagggc
attcgcgacgggctggcgcgcagcgagatggcgattctctaccgctccaacgcccagtcg
cgggtgctggaagaggcgctgctgcgcagcggcattccttaccgtatctacggcggtcag
cgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcggctgatggccaac
cgcggcgacgatggtgcgctggagcgcattatcaatctgccgacccgcggcatcggcgac
aagacggtcgagctgctgcgccagcaggcgcgcgagcgagatgtctccatgtggcaggcg
gcctgcgacctgatcgacaacaagggcctgccgggccgggcggccaacgcggtgcagggc
tttctggtgctgatcgaggaaatggccgagcgtgccgaagggttgccgctctacagccag
acccagattgccattgagcacagcggcctgctgcgcttccacgagcaggaaaagggtgac
aaggcgcaggcgcgggtcgaaaacctggaagaactggtctctgccgcccgtggtttcgag
aacgatatggcggacgaggaagaggaaggcgatgtactgctggccttcctcgcgcatgct
tcgctggaagccggcgaaacccaggctgaccgctttgaagacagcgtacagctgatgacc
ctgcacagcgccaagggcctggagtttccgttggtattcatggccggggtagaggaaggg
ctgttcccgcacaagatgagcctggaagatccgggccggctggaggaagagcgccggctg
gcatacgtgggcattacccgggcgatgcagcagttggtgattacctgggccgaaacccgc
cgcctgtacggcagtgaaaccttcaacaaggtgtcgcgctttgtccgtgagattccacct
gaactgattcgcgaagtgcgcctgggcagccaggtcagccgaccctttggcccggccaag
ggcaatctgttcgccagtgaagcgaccgaaagcaccggctttgcccttggccagcgcgtc
gaacacgccctgttcggtgaaggggtagtgctcaactatgaaggccacggcgcgcaggca
cggatacaggtcaattttgatgatgaaggcagcaagtggctgatggtggcgtatgccaaa
ctgcaggcgctgtag
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