Halopseudomonas aestusnigri: LO767_17410
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Entry
LO767_17410 CDS
T07924
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
haes
Halopseudomonas aestusnigri
Pathway
haes03030
DNA replication
haes03410
Base excision repair
haes03420
Nucleotide excision repair
haes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LO767_17410 (polA)
03410 Base excision repair
LO767_17410 (polA)
03420 Nucleotide excision repair
LO767_17410 (polA)
03440 Homologous recombination
LO767_17410 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haes03032
]
LO767_17410 (polA)
03400 DNA repair and recombination proteins [BR:
haes03400
]
LO767_17410 (polA)
Enzymes [BR:
haes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LO767_17410 (polA)
DNA replication proteins [BR:
haes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LO767_17410 (polA)
DNA repair and recombination proteins [BR:
haes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LO767_17410 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LO767_17410 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UGV30708
LinkDB
All DBs
Position
complement(3736475..3739216)
Genome browser
AA seq
913 aa
AA seq
DB search
MTDTTPLVLVDGSSYLYRAFHALPPLTTSKGQPTGAVKGVLNMLKSLRKQYPKSPFAVVF
DAKGPTFRDEMFEQYKSHRPPMPDDLRAQIEPLHAAVRALGLPLLCVDGVEADDVIGTLA
RQSADAGREVVISTGDKDMAQLVDEHITLVNTMTNTVMDIQGVHDKFGIGPELIIDYLAL
MGDKVDNIPGVPGVGEKTALGLLTGVGGGLDVIYNSLDKVPELPIRGAKKLPEKLQEHKE
MAYLSYQLATIKLDVELEVKVDALMPGEVDRDTLIALYREMEFKTWLDDLLREAKADPSA
DGADDDNAETEKRYEIITEQADFDRWLDKLENAELFAFDTETTSIDAQRAELVGVSLAVE
PNEAAYIPVAHSYMGVPDQLDRNAVLAALKPYLEDPNKAKVAQHAKYDINVLAHYDIRVQ
GVAFDTMLESYVLDATATRHDMDSLSLKYLGQSTIKFEDIAGKGSKQLTFDQIALEQAGP
YAAEDADVTLRLHQALWAKLQPQPSLAKVLQEIEMPLMPVLAGIERNGALVDAKLLGEQS
IELGEKMVALERQAFELAGEEFNLGSPKQLGAILYEKQGLPVLSKTAKGQPSTAEAVLAE
LAEQGFELPQVIMQYRSVSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPN
LQNIPIRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLAQDAGLLDAFRHDLDVHR
ATAAEVFGVDLEEVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQAQAYIDRYFTRY
PGVLSYMERTREQASEQGYVETLFGRRLYLPEIHAKNQAMRKAAERTAINAPMQGTAADI
IKRAMIKVAQWLDDSALDARVIMQVHDELVLEVREDQIEAVSQGLKERMGQAADLDVPLV
VEVGVGNNWDEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgacagacactacccccctcgttcttgtggacggctcgtcctacctttatcgcgccttc
catgccctgccgccgctgaccaccagcaagggccagcccaccggcgcggtcaagggcgtt
ctgaacatgctcaagagtttgcgcaagcagtacccgaaaagcccctttgccgtggttttc
gacgccaagggcccgaccttccgcgacgagatgttcgagcagtacaagtcacatcgcccg
cccatgcccgacgacctgcgtgcccagatcgagcccctgcacgcggcggtgcgcgcgctc
ggcctgccgctgctgtgcgtggacggcgtagaggctgacgacgtgatcggcaccctggcc
aggcagagcgccgacgccggccgggaggtcgtgatctccaccggcgacaaggacatggcc
caactggtcgatgagcacatcacgctggtcaacaccatgaccaatacggtgatggatatt
cagggcgtacacgacaaattcggcatcgggccggagctgatcatcgactacctggcgctg
atgggcgacaaggtcgacaacatccccggagtgcccggcgtcggcgaaaaaaccgcgctc
ggcctgctgaccggtgtcggcggcggcctggacgtcatctacaacagtctcgacaaggtg
cccgagctgccgattcgcggcgccaagaagctgcccgagaagctgcaggaacacaaggag
atggcctacctctcctatcagttggcaacgatcaaactggacgttgagctggaggtaaag
gtcgatgccctgatgccgggcgaagttgaccgcgatacgttgatcgcgctgtaccgcgag
atggagttcaagacctggctggacgacctgttgcgcgaagccaaggctgacccgagtgcc
gatggcgctgacgacgacaacgcggaaaccgagaaacgctacgagatcatcaccgaacag
gccgatttcgatcgctggctcgacaagctcgagaacgccgagctgttcgcctttgacacc
gaaaccaccagcattgatgcccagcgcgccgaactggtcggtgtatcgctggcggtcgaa
cccaacgaagccgcctatatcccggtcgcccacagctatatgggcgttcccgatcagctc
gaccgcaacgcggtgctggcggcgctcaagccctatctggaagatccgaacaaggccaag
gtcgcgcagcacgccaagtacgacatcaatgtgctggcccattacgatatccgcgtgcag
ggcgtcgccttcgataccatgctcgaatcctatgtgctcgatgccaccgctacccgccac
gacatggacagcctctcgctcaagtatctgggccagagcaccatcaagttcgaagacatc
gccggcaagggcagcaagcaactgacctttgatcagatcgcactggaacaggccggcccc
tacgccgccgaagacgccgacgtgaccctgcgcctgcaccaggccctgtgggccaaactg
cagccacagccatcgctggccaaggtcctgcaggaaatcgaaatgccgctgatgccggtc
ctggccggcatcgaacgcaacggtgcgctggttgacgccaagctgctcggcgaacagagc
atcgagttgggcgagaaaatggtcgctctggagcgtcaggcattcgagctggcgggcgag
gagttcaacctcggctcacccaagcaactgggcgccatcctgtatgaaaagcagggcctg
ccggtgctgtcgaaaaccgccaagggccagccatcgaccgccgaggcggtgcttgcagaa
ctggccgagcaaggcttcgagctgccgcaggtgatcatgcagtaccgcagcgtcagcaaa
ctcaagagcacctacaccgaccgcctgccggagcagatcaacccgcgtaccggacgcatc
catacctcctatcatcaggcggtggcggcaacgggtcgcctgtcgtcctctgatccgaac
ctgcagaacatcccgatccgcaccgccgaaggccgccgcattcgccaggcctttatcgcg
ccaaagggctacaaactgctggcggcggactactcgcagatcgagctgcggatcatggcg
catctggcacaagatgccggtctgctggacgccttccgccatgatctcgatgtgcaccgc
gcaaccgctgccgaggtattcggcgtggacctggaggaggtcaccaccgaccagcgccgc
agcgccaaggccatcaacttcggcctgatctacggcatgagtgcctttggtctggccaaa
cagatcggtgtcgatcgcaagcaggcgcaggcttacattgaccgctacttcacccgctac
ccgggcgtgctgagctatatggaacgcacccgcgagcaggccagcgagcagggctacgtc
gaaaccctgttcggtcgccgcctgtacctgccggaaattcatgccaagaaccaggccatg
cgcaaggctgccgagcgcaccgcgatcaacgcaccgatgcaaggcaccgctgccgatatc
atcaagcgcgccatgatcaaggtcgcccaatggcttgacgacagcgcgctggacgcccgt
gtgatcatgcaggtccacgacgaactggtgctggaagtgcgcgaagaccagattgaggcc
gtcagccaaggactcaaggagcgcatgggccaggccgcagacctggacgtaccgctggtg
gtcgaggtcggcgtgggcaataactgggacgaagcgcactaa
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