Halomonas sp. SF2003: C8233_00225
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Entry
C8233_00225 CDS
T05423
Name
(GenBank) choline transporter
KO
K03451
betaine/carnitine transporter, BCCT family
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
C8233_00225
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BCCT
Motif
Other DBs
NCBI-ProteinID:
AVV32313
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Position
71342..72979
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AA seq
545 aa
AA seq
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MSSSAPKTASGSGSPTREPRASHKARDEIDWRVFLPSVLVIAGLIIPIILFPESGEAAVN
AAFAFATGNFGWLYLLAGFSVVVFLIGLAFSRYGNVRLGGPQDTPEFSYFSWVAMIFAGG
IGIAIVNWAWVEPIYYFTGPPFDVKAGSDAAAEWALAYGQFHWGLTPWAFYCLPAIPIAY
SMYVRNRPGVRLSVASSGVLGKHADGWWGVLLDAVVVFGIVGGVGTSLGLAVPLVSRLLG
DLLGIEPSFALNLGVLLIWTAIFSASVWFGLAKGIKILSDINVILAIALLAFTFTAGPSL
FMVEGWVNSLGTMLSSFVTMSLWTDPVGDSTFWKDWTVFYWAWWIAYAPMMGLFVARISR
GRTIRELIIAELVFGSLGCWVFFAVWGGYALDLQVSGTLDVAAALSDGGIPGAVSAILAT
LPFSELITASFILLCFIFLATTLDSSAYVLASVTTRELSGYQEPKRSVRLIWAFLIAGVG
VALIQLGGLKAVQTSTIVVALPMIPVLFILTWSLVRWLRQDFARKVLEPHLVLETPSPRD
DAKPR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttctgcgcccaagacggcttccggcagcgggagcccgacacgcgagccccgc
gcctcccacaaggcccgcgacgagatcgactggcgggttttcctgccctcggtgctcgtc
atcgctggcctcatcattcccatcatcctgtttcccgaatccggtgaggctgccgtcaat
gcggccttcgccttcgcgaccggcaattttggctggctttacctgctggcgggcttctcc
gtcgtcgtgttcctgatcggtctggcgttcagccgctacggcaatgtccgtctgggcggc
ccgcaagacacgccggagttctcgtatttcagctgggtcgcgatgatcttcgccggcggc
atcggtatcgccatcgtcaactgggcgtgggtcgagccgatctactatttcaccggcccg
ccatttgacgtcaaggccggcagtgacgcagcggccgagtgggcgctggcctatggccag
tttcactgggggctgacgccctgggcgttctattgcctgccggcgattcccatcgcctat
tccatgtatgtccgcaatcgcccgggcgtgcgtctgtccgtggcctccagcggcgtgctc
ggcaagcatgccgatggctggtggggcgtgttgctggatgcagtggtggtgttcggcatc
gtcggcggtgtcggcacctcgctggggctggcggtgccgctggtatcacgactgctcggc
gatctgctgggcatcgagccgtcctttgcgctcaatctgggagtgctgctgatctggacg
gcgatcttctccgccagtgtctggttcgggctggccaagggcatcaagatcctctccgac
atcaacgtgattctggccatcgccttgctggccttcaccttcaccgccgggccgtcgctg
ttcatggtggaaggctgggtcaacagtctcggcaccatgctgtcgagcttcgtgaccatg
agcctatggaccgacccggtgggcgattcgaccttctggaaggactggaccgtcttctac
tgggcctggtggatcgcctacgcgccgatgatggggctgttcgtcgcccgtatctcgcgg
gggcgcaccattcgtgaactgatcatcgccgagctggtgttcggctcgctgggctgctgg
gtgttcttcgcggtctggggcggttatgcgctggacctgcaggtgagtggcaccctggat
gtcgcggctgcactcagcgacggcggtatccccggcgccgtgtccgcgattctcgccacg
ctgccgttctccgagctgatcaccgcaagcttcatcctgctgtgtttcatcttcctcgcc
accaccctggacagttcggcctatgtgctggcgtcggtgaccacgcgtgagctctcaggc
tatcaggagcccaagcgcagcgtgcgcctgatctgggccttcctgatcgccggtgtcggg
gtggcattgatccagctgggcggcctcaaggcggtgcagacttccaccatcgtggtcgcg
ctgccgatgattccggtgctgttcatcctgacctggtcgctggtgcgctggttgcgccag
gacttcgcgcgcaaggtgctggaaccgcatctggtgctggagacccccagcccgcgcgat
gacgccaagcctcgctga
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