Halomonas sp. SF2003: C8233_00270
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Entry
C8233_00270 CDS
T05423
Name
(GenBank) choline transporter
KO
K03451
betaine/carnitine transporter, BCCT family
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
C8233_00270
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Gene cluster
GFIT
Motif
Pfam:
BCCT
Motif
Other DBs
NCBI-ProteinID:
AVV32322
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Position
85229..86836
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AA seq
535 aa
AA seq
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MQEAVPPASDGDHLDPRVFIPAVLVILAFIGPVILFPDASTALINAAFSFATGKFGWLYL
VAGLSVVGFLIWLAFSRYGNVRLGGAEDTPDFSYFSWVAMIFTCGMGIAIVNWAWVEPIY
YYTSPAYHVAAKSREAAEWALAFGQFHWGLTPWAFYCLPGLPIAYSMYVKKRDGVRLSVA
SRGVLGRHADGAWGVLLDSIVVFGIVGGVGTSLGLAVPLVSQLVSGILGMEANFGLEVAV
LCIWTAMFSASVWFGLAKGIKILSDVNVILAIFLLAFTFIVGDSQFMVEGFVNSLGKTLG
NFIPMSLWTDPAGDSTFWKDWTVFYWAWWIAYAPMVGLFVARISRGRTIRELIIAELVFG
SLGTWVFFAVWGGYALDLQISGALDIKALLDSGGIPLAVEGILQTLPYAKLVTVAFILLC
FIFLATTLDSSAYVLASVTSRKLSGYQEPKRSFRLIWAFLIAAVGVALIQLGGLQTVQTS
TIVVALPMIPVMLILALSMLRWLKNDFPKEELNPVLVIDDMPAFQRKSKKTNRQA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaagcagttccccccgccagtgatggcgatcatctggacccgcgtgtcttcatc
cccgccgtattggtcatcctggccttcatcggcccggtcatcctgttcccggatgccagc
accgcgctgatcaatgccgctttctccttcgccaccggcaagttcggctggctgtatctg
gtggccggcctgagcgtcgtcggatttctcatctggctggcctttagccgctacggcaac
gtccgactgggcggggcagaggacacgcccgatttctcctacttcagctgggtggcgatg
atcttcacctgcgggatggggatcgcgatcgtcaactgggcgtgggtcgagccgatctac
tactacacctcgccggcctatcacgtggcggccaagagccgtgaggccgcggagtgggcg
ctggccttcggtcagttccactgggggctgacgccatgggccttctattgcctgccgggc
ctgccgatcgcctactccatgtacgtcaagaagcgtgatggcgtgcgtttgtccgtcgcc
tcgcgcggcgtactgggccgtcatgcggatggcgcctggggcgtgctgctggattccatc
gtcgtgttcgggatcgtcggcggcgttggcacctcgctggggctggcggtcccgctggtc
tcgcagctggtcagcggtatcctcggcatggaagccaacttcgggctggaagtcgcggtg
ctgtgcatctggacggcgatgttctccgccagtgtctggttcggcctggccaagggcatc
aagattctctccgacgtcaacgtgatcctggcgatcttcctgctggccttcaccttcatc
gtcggtgactcgcagttcatggtcgaaggcttcgtcaacagcctcggcaagaccctgggc
aacttcatcccgatgagcctgtggaccgacccggcgggggattccaccttctggaaggac
tggaccgtcttctactgggcctggtggatcgcctacgcgccgatggtgggcctgttcgtg
gcccgtatctcgcgcggtcgtaccatccgtgagctgatcatcgcggagctggtgttcggc
tcgctgggaacctgggtgttcttcgcggtgtggggcggttacgcgctggacctgcagatc
agcggcgcgctggatatcaaggcgctgctggacagtggcggtatcccgctggcggtggaa
ggcattctgcagaccctgccgtatgccaagctggtcacggtggccttcatcctgctgtgc
ttcatcttcctggcaaccacgctggacagctcggcctacgtgctggcctcggtgacctca
cgcaagctgtccgggtatcaggagcccaagcgctcgttccgcttgatctgggccttcctg
atcgcggccgtcggcgttgcgctgatccagttgggtggcctgcagacggtgcagacctcg
accatcgtggtggcgctgccgatgattccggtgatgctgattctggcgctctcgatgctg
cgctggctcaagaatgacttccccaaggaagagctgaatccggtactggtcatcgatgac
atgccggccttccagcgcaagtcgaagaagacgaatcgccaggcgtaa
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