Halomonas sp. SF2003: C8233_00690
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Entry
C8233_00690 CDS
T05423
Name
(GenBank) chondroitin lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
C8233_00690
Enzymes [BR:
haf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
C8233_00690
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GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Myb_DNA-binding_2
Motif
Other DBs
NCBI-ProteinID:
AVV32393
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Position
181312..183489
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AA seq
725 aa
AA seq
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MEQTLLLDRAALAGLRAAHEAPDSSRVLSERLALAEQDMRSVLAEPLSIPGQGEAGGEEH
ARHKLNYQHVSLASQLWLVTHDERYLEFVRGLLLGYSQMYEALPAHVSRDSNPPGKLFHQ
CLNEGMWLLYAADAYGNIKAQLPVGEREQIEQHLLRPMIDLLVVQNAHDFDVVHNHGIWS
VAAAGIAGLVLEDEALVEQALLGNARDGISGGFLAQLDQLFSPDGYYLEGPYYHRFALRP
MVLFADALINSGVRPRIHEHRDQIIRKAILCLQQMAFPDGCFLALNDSSKTMGLVDEGAM
LGAAFLLQQYRDTRLNPAVAGLIRDKVQRLPLCTGSLALAEFVEQASQSSEARGSRFISD
GSEGGAGGIAILRAPTSRGSESMLYMSFGQHGSDPTLHSALDHGHFDGLHFGYHNGQHEV
LTDYGFSRWVNIEPKFGGRYTPENRSYAKQSVAHNTLVVDETSHHDLDTARACQHHGTLV
CFETSHPQVQLASARLDDYVPGVTLQRSLMLVTLPELAEPLVIDLMRATSDTPHHYDYPL
HYQGQLMVAQPALHQQTSPTALGDANGYQHLWQMSTGDELPAGADQAVTWLQDDQFVTAR
MVCSAPATLVQGLIGANDPQSNLRNEPYLILRSTGSRHTVASVIETHGVFDEAREISRDA
RPQVSRCQLLHDSDEACVLELETCSGARHRLAVALRPSQGQAPGEHRVEVAGETLCWQGW
WTMEP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaacagacattgctattggatcgtgcggcccttgccggactgcgcgccgcccacgag
gcaccggattcctcgcgcgtattgtcagagcggctcgcgcttgcagagcaggacatgcgc
tcggtgctggccgagcccctgagcattcccgggcaaggtgaggcgggcggagaagagcac
gcgcgccacaagctcaattatcagcatgtcagcctggcctctcagctgtggctggtgacg
catgatgagcgctatctcgaattcgtgcgtggcctgttgctgggttactcgcagatgtat
gaagcactgccggcgcatgtctccagggacagcaatcctcccggcaagctgtttcaccaa
tgcctgaacgaaggcatgtggctgttatatgccgcggacgcctacggcaacatcaaggca
cagctaccggtcggtgagcgcgagcagatcgaacagcacctgttgcggccgatgatcgac
ctgctggtggtacagaacgcgcatgacttcgatgtggtgcataaccatggcatctggtcc
gtggccgcagccggcattgccgggctggtgctggaagatgaggcactggtggagcaggca
ttgctgggcaatgctcgcgatggcatcagtgggggatttctcgcgcagctggaccagctg
ttctcgccggacggctattacctggaaggcccgtactaccatcgcttcgcgctgcgtccg
atggtgctgtttgccgatgcgctgatcaacagcggcgtgcggccgcggattcatgaacat
cgtgaccagatcatccgcaaggccattctctgtctgcaacagatggccttccccgatggg
tgttttctggccctgaatgacagctcgaagacgatggggcttgtcgatgagggcgcgatg
ctgggagctgcgttcttgctgcagcagtatcgggatacccgtttgaacccggcggtagcg
gggttgattcgcgacaaggtacagcgcttgccattgtgcacgggctctcttgcattggcc
gagttcgtagaacaggcgagtcaatcaagtgaggcacgaggcagtcgcttcatcagtgat
ggcagtgaagggggtgcaggcggaatcgccattctgcgtgcgcctacctcacgcggtagc
gagagcatgctctacatgagcttcggtcagcatggcagcgatccgacactgcattccgcg
ctggatcacggacatttcgatggcctgcatttcggataccacaatggccagcatgaggtg
ctcacggattatggcttcagccgctgggtgaatatcgaacccaagttcggcgggcgttat
accccggaaaaccgtagctacgccaagcagagcgtggcgcataacaccctggtggtggat
gagacctcgcatcatgacctggacaccgcacgcgcctgtcagcatcacggcaccctagtg
tgtttcgagacctcccatccgcaggttcagctcgccagtgcgcgtctggatgactacgtg
cccggcgtcactttgcagcgcagcctgatgctggtcaccttgccggagctcgccgagcca
ctggtgatcgacctgatgcgcgccaccagcgataccccccatcactatgattatcccctg
cactatcaaggccagttgatggtcgctcaacccgccttgcaccagcagacctcgcccacg
gcattgggcgacgccaatggctatcagcatctctggcagatgagtaccggggatgagctg
cccgcaggtgccgatcaggcagtcacctggctgcaggacgatcagttcgtcacggcgcgc
atggtgtgctcggcgcctgccaccctggtgcaaggcctgatcggcgcgaatgatccccag
agcaatctgcgcaatgagccttatctgatcctgcgctccaccggcagtcgtcacaccgtt
gccagcgtgatcgagacacacggtgtcttcgatgaagctcgcgagatctcgcgtgacgcc
cgcccgcaggtaagccgttgccagttgctgcatgacagtgacgaggcctgcgtgctggag
cttgagacgtgcagcggcgctcgacatcgtctggccgtggcattgcgcccctcacaaggg
caagcgccaggcgagcatagggtggaagtggcgggagagaccctctgctggcaaggctgg
tggacgatggagccatga
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