Halomonas sp. SF2003: C8233_00695
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Entry
C8233_00695 CDS
T05423
Name
(GenBank) chondroitin lyase
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
C8233_00695
Enzymes [BR:
haf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
C8233_00695
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GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
HTH_71
Motif
Other DBs
NCBI-ProteinID:
AVV32394
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Position
183692..185791
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AA seq
699 aa
AA seq
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MSAKSEYLLWSSSELEMLRRQCEADSSLGRSLKVLEQQVAASIARGVVVPGQGEAGSFEH
NTHKENARLIEGAALLGRLNDDEAALAHARELLESYAACYREMPFQVARNTNPPGKLFHQ
ILNEHIWLLHASLGLALLKPSLSDSQYRALLEDLFLPMLEMFTETYRHDFDRIHNHGLWA
VAAVGICAMVIESPEHLAISIDGLDGSGETGGFLAQIALLFSPQGYYVEGPYYHRFAIHP
LCLFAEAIERQQPERNIFAHADGRIGKSLHVLLSTAYPDGRFPALNDASRTMNLDDEGAR
CAMALLAARYEAAPELLTLAHQQQGSWLHANGVALKQAMQQVHADVQATSQRFSDGPEGN
SGAHAHLKHGYGLQAQHVVLTAGQHGMGHGHFDQLGMTYFARGKEVLQEYGFARWVNVET
KFGGRYLKENEGYAKQSVAHNLVVVDMQSQHDGDHALADTHHAELALLAGSDAAATARCD
NAYAGVTMQRQLVLLHSRHTQTPLLVDIFALSSAEPHVYDYTFNHGGQVVRWWETESSPQ
PVSTALATLEVLGDSAGYQHLWKVAQRPADTAHCMTWLAGDSFHSWHQITQAPAEAYQLR
VGANDPDHNLRPDAKVMTRLTATSQTFYSLFESHGHFDESLEQCSGARPQVLNLRALEAC
EGAVAGIEALEITLRTGQLLLVLAEADAVPPGATSPWGP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaagagtgagtatctgttgtggtcatccagtgagctcgaaatgcttcgtcgg
caatgcgaggcagatagctcactggggcgcagcttgaaggtgttggagcagcaggtggct
gccagcatcgcacgcggcgtggtggtgcctggccagggtgaggccgggagtttcgagcac
aacacccacaaggagaatgcccgcctgatagaaggtgcggcgctgttgggacggctcaac
gatgatgaggcggccctggcgcatgcccgggagttgctggaatcctacgcggcctgctat
cgcgagatgccgtttcaggtcgcgcgcaataccaacccgccgggcaagctgtttcaccag
attctcaacgaacatatctggttgctgcatgcctcactcggccttgccttgctcaagccg
tcattgagcgatagccagtatcgggcgctgctggaggacttgttcctcccgatgcttgag
atgttcaccgagacctatcggcatgatttcgatcgtatccataaccacgggctgtgggcc
gtggcggcggtcgggatctgcgcgatggtgatcgagagtcctgagcatctggcgatctcc
atcgacggactggatggcagcggcgagaccgggggctttctcgcccagatagcgctgctg
ttctcgccgcagggctattacgtggaagggccgtattaccatcgtttcgcgattcatccg
ctgtgcctgttcgccgaggcgatcgagcggcaacagcccgagcgcaatatcttcgcgcac
gccgacggacgtatcggcaagtcgctgcatgtcttgctctccacggcctatccggatggt
cgcttcccggcgctgaatgacgcctcacgcaccatgaacctggatgatgaaggggcgcgc
tgcgccatggcgctgctggcagcgcgctacgaggcggccccggaactgctgactctcgcg
catcagcagcaaggcagctggttgcatgccaatggcgtggcactcaagcaggccatgcag
caggtccatgctgatgtgcaggccaccagtcagcgtttcagcgatggccccgaaggcaac
agcggggcgcacgctcacctcaagcacggctatggattgcaggcgcagcatgtggtgctc
accgcggggcagcacggcatggggcatggccactttgatcagctgggcatgacgtatttc
gcgcgcggcaaggaagtgctgcaggaatatggtttcgcgcgctgggtcaatgtcgagacc
aagttcggcgggcgttacctcaaggagaacgagggctacgccaagcagagcgtcgcgcac
aacctggtggtggtcgacatgcaatcccaacatgacggtgatcacgcgctggcggatacg
caccacgctgagcttgcgctgctggcgggcagtgatgccgcggcgactgcccgctgtgac
aacgcctatgcgggcgtgaccatgcagcgtcagctggtattgctgcactcgcgccatacg
cagacaccgctactggtcgatatcttcgcgctgagctctgcagagccgcatgtctatgac
tacaccttcaatcacggcggccaggtggtgcggtggtgggaaacggaatcgtctccgcag
cctgtctccaccgccctggcgacacttgaggtactgggcgacagcgcgggctatcaacac
ctatggaaggtggcccagcgtccggcggacaccgcgcactgcatgacctggcttgcaggc
gacagctttcatagctggcaccagatcacccaggcacccgccgaagcctatcagttgcgg
gtcggggccaacgacccggaccacaacctgcgtcctgacgccaaggtgatgacacgtctg
accgccacctctcagaccttctattcgctgttcgagagccacgggcatttcgatgaatcc
ctggagcaatgcagtggcgcacgcccacaggtgctgaacctgcgtgcgctggaagcctgc
gaaggggcagtagcgggtatcgaggccctcgagatcaccttgcgtaccgggcagctgctg
ttggtgctggctgaagcggacgccgtgccgccgggggcaacatcaccctggggaccatga
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