Halomonas sp. SF2003: C8233_01005
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Entry
C8233_01005 CDS
T05423
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
haf
Halomonas sp. SF2003
Pathway
haf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C8233_01005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_01005
Transporters [BR:
haf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C8233_01005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AVV35295
LinkDB
All DBs
Position
complement(252478..253509)
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AA seq
343 aa
AA seq
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MAALLGSASVSAADMPADLLEAAQSEGRADSVGMPDSWANWKDTWADLESKYSIAHSDTD
MSSAEEVAKFKAEGENATADIGDVGFAFGPIAVQQGVTQAYKTTTWEQIPEWAKDKDGHW
VLGYTGTISFMINKTLVSEDERPTSFADLAEGDYKVSVGAVGKASQANNAILAAAFANGG
KESDLTPGLEVFAELARQGRLSLAEPSIANLEKGEVEVALLWDFNALNYRDQINRDTFEV
VIPSDASVTSGYATIINKHAAHPNAAKLAREYILSDAGQLNLAKGYARPIRAEHLILPED
IAAKLLPNEQYANARPVQDFAGWEASAKQLPRQWQSQVLIHQQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgttgggcagtgcctccgtcagtgccgccgacatgccggctgaccttctt
gaggccgctcagtccgaaggccgtgccgatagcgtcggcatgccggacagctgggccaac
tggaaggacacctgggcagacctcgagtcgaagtattccatcgcgcatagcgataccgac
atgagctccgccgaggaagtcgccaagttcaaggccgagggtgagaacgccaccgccgat
atcggtgacgtgggcttcgccttcggtccgatcgcggtgcagcaaggggtgacccaggcc
tacaagaccacgacctgggagcagatcccggagtgggccaaagacaaggacggccactgg
gtactgggctacaccggcaccatttccttcatgatcaacaagacactggtcagcgaagat
gagcgcccgacctccttcgccgatctcgccgagggtgattacaaggtgtccgtcggcgcc
gtgggcaaggcctcccaggccaacaacgccattctggccgctgccttcgccaatggcggc
aaggaatccgacctgacaccgggcctggaagtcttcgcggaactggcgcgccagggccgt
ctatcactggcagagccgagcatcgccaacctggagaaaggcgaagtcgaagtcgccctg
ctgtgggacttcaatgccctgaactatcgcgaccagatcaaccgcgacaccttcgaggtc
gtcataccgtctgatgcctccgtgacctccggctacgccaccatcatcaacaagcatgcc
gcgcacccgaatgccgccaagctggcccgtgagtacatcctctccgacgccggtcagctg
aacctggccaagggctatgcccgtcccatccgcgccgagcacctcatcctgcccgaggat
atcgccgccaaactgctgcccaacgagcagtacgccaatgcacgtccggtccaggacttc
gcgggctgggaagccagtgccaagcagctgccgcgtcagtggcagtcccaggtactgatc
caccagcagtga
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