Halomonas sp. SF2003: C8233_01490
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Entry
C8233_01490 CDS
T05423
Name
(GenBank) C4-dicarboxylate ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
haf
Halomonas sp. SF2003
Pathway
haf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C8233_01490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_01490
Transporters [BR:
haf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C8233_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AVV32530
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All DBs
Position
complement(360677..361708)
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AA seq
343 aa
AA seq
DB search
MHCPAHNNDNVDTAMKTLKPALLLPLLALLPATQSMATELRMLSSYDQTTAYSREIAQRF
IKEVEANKAADLTIKLTGPDVVPPFEQLQPVAAGVFQLLYTHAAYHTNTTGVGAAMDGVA
VNPEQTRESGLWDMVDEHYNGLGLKLIAIPPLGSHGFQYVLKEPITGTPGLDGRRLRGSP
TYTNVTKGLGGTPVLMSSGDVYSAMDRGVIDGAAWGLNGVKDMGWQEVAGYYSKPTFGQT
YNFVLMNLNAFNTLSPEQQQVLLDEGRELETEIVPILDELAVEEWKALDEAGMQPTEFAP
EDAERLDALVTDGIWQLGIDKTPDTVTAMRELAIEKNLTTVSE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcactgccccgctcacaataacgataacgtggatactgctatgaaaaccctcaagccc
gctctgttgctcccgctgctcgctctcctcccggccacccagtccatggccaccgaattg
cgcatgctgtccagttacgaccagaccactgcctactcccgcgagattgcccagcgcttc
atcaaggaagtcgaagccaacaaggccgccgacctcaccatcaagctgaccggcccggat
gtggtgccgcccttcgagcagctgcagcctgtcgcggccggtgtcttccagctgctgtat
acccacgccgcttatcacaccaacaccaccggcgtcggcgccgcgatggatggcgtggcg
gtgaatccggaacagacgcgtgaatccggcctgtgggacatggtcgatgagcactacaac
ggcctgggcctcaagctgatcgcgattccgccgctgggcagccacggcttccagtacgtg
ctgaaggagccgatcaccggtacgccgggtctggatggccgccgtctgcgcggcagcccc
acctataccaacgtcaccaagggcctgggcggtacgccggtgctgatgtccagtggcgat
gtctattccgctatggaccgtggcgtgatcgacggcgcggcctggggcctgaatggcgtc
aaggacatgggctggcaggaagtcgccggctactactccaagccgaccttcggtcagacc
tacaacttcgtgctgatgaacctgaacgccttcaacaccctgtcgccggaacagcagcaa
gtgctgctcgacgaaggccgtgagctggaaaccgagatcgtcccgatcctggatgagctg
gcagtcgaagagtggaaggcgctggacgaagccggcatgcagcctaccgaattcgcaccg
gaagacgcagagcgtctggatgccctcgtcaccgacggtatctggcagctgggcatcgac
aagaccccggacacggtgaccgccatgcgtgaactggcgatcgagaagaacctgaccacc
gtcagcgagtaa
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