Halomonas sp. SF2003: C8233_02375
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Entry
C8233_02375 CDS
T05423
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_02375
Transporters [BR:
haf02000
]
Other transporters
Pores ion channels [TC:
1
]
C8233_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AVV32676
LinkDB
All DBs
Position
complement(579941..584119)
Genome browser
AA seq
1392 aa
AA seq
DB search
MEMLELSNPYVRRGGLVIRLLIWLLVFLIGLTMLLVGGVLSPWGTGLVLDQARSRGFIDY
SQASGSPLEALSLKDVSLDLPGLAVNADSLSLAWGEDCLLKGKLCLESLESSGLAITLSD
SGASAEPEAESGESLNVPIVVPIPIEVRKVAIDDFALALADGSRVTFDHFHTSAALSVST
LTLGETRLITSRFIPADAAAAQAVADTASLEGVSITPEAQQAASAVVNTQVVASQAESAA
KAITDETVTDDAAEVSGKTAAGTTDQTAQAGRIALPEVYIPLTIEVPDLAIEDFALEGPS
PYEVSRLSLALEAEGHDITLSRLEVDSRDVNADLVAQVTLKDEYPLSATLNAETLIDPVR
HEKLRLSLEGSLADLEASLKADGPLAAELVASADVLDSDLPFEARLSSERITWPFAAVTD
ASDDTSADAQKGAQTATQAKDGKNTSGTAAAASFTPDYSVENLALVAKGSLSGYTTTLDA
IIEGRDIPRATLSLAGDGDLAHYRWQPLKIALKRGSATTRGEIHWQEGIQVAAELALDKL
HPEDLLPAPTGGGQKAVRGELSGNLVASFQQPQQGPWAVDVSKLDIHGTLLERPLTLTGK
LSGNADMQWDVNALELRQGQNRLSANGKIAKTITLAANIDFPALSTLMPDIAGELKGKID
ASGTLDKPQLASNFSARRLQIGENRISDMALSAGVDARKRGIDDPALDIALNADDVRAGG
QQIATVALTLGGFLSDHTLQFDTEMAGEMPLSRLGLTLKGGLDKAREHYRGALSPLTANT
DFGDFNFDTPASFDANLAKGSVLVQPFCLSREQGGQICVAEPLSAGNDGQAVVTLEGIPL
DMAQSAMPESWTIGGATGGKITASWKQGGQRWNADAELAGKLTLAGEDADGNAWSLPETT
LQLALEATPDKADLDTQIRLDSAGGIGLTVSVLDPAGAGQLDGSLAIRDIDLSPYRPLVA
GMTQLEGKLAGDVEVGGNLSLPSLTGPIALTGVKVQGEGLPVSLSDAQFTVDFDGNSADI
DGYLVGNDARWGIDGEAAWPTLEDWTASLNLDGAKNPLELHIAGIGRMRVAPDLEINASP
TLLKLRGDVKVPWTRIEVDQVPPSAVSPSSDTIIIERPSDEDTSNPAELADGSDTAKALN
EAGMALDVRIGIHIGPDARLEAMGLKTKLRGDLDVRQSKGGVQVFGEVNLVDGTYKSFGQ
DLQISKGQVLLAGPPSSPRLNIEAIRDPDNTEDDVTAGVRVTGLASSPSVEIFSDPSMDE
SSALSYLLRGEGLDSDTSSDSAVTSALIGMSLAQSGQVVGQIGETFGVRDLSLDSSGSGD
DSQVVVSGYIAPDLKLSYGVGLFSPIAELTLRYKLFRNLYAEAVSGTAQAVDLLYSFSLG
RSELAPRVGKDR
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggagatgttggaattgtctaatccctatgtacgtcggggcggcctggtcatccggttg
ctgatatggctgctcgtgttcctgatcgggctgacgatgctgctggtcgggggcgtgctg
tctccgtggggcaccgggctggtgctcgatcaggcgcgctcgcgtggcttcatcgattac
tcccaggcctccggctcaccgctggaagcactgtcactcaaggacgtctcgctggacctg
ccggggctggccgtcaatgccgactcgctgtcgctggcctggggcgaggactgcctgctc
aagggcaagctgtgtctcgagtcgctggagtccagtggtctcgcgatcaccctgagcgat
agcggtgccagcgctgagccggaagcggagagcggtgagagcctcaacgtgcccatcgtg
gtgccgattcccatcgaggtgcgcaaggtcgctattgatgacttcgccctggcgctggcg
gatggcagtcgcgtcaccttcgatcatttccatacctcggctgcgctgtcagtgagtacg
ctgacgctgggcgagacacgcctgatcaccagtcgtttcattcccgccgatgccgccgcg
gctcaagcggtggcagacactgccagtctcgagggagtgagcatcacgcctgaggctcag
caagcggcaagtgcagtggtcaacactcaggtcgtggcgtctcaagccgagagcgccgcc
aaggccatcacggacgagaccgtcacggatgacgccgcagaagtgtctggcaagactgcc
gctggaaccacggatcagacagcacaggccgggcgcatcgccttgccggaagtctatatt
ccgctgaccatcgaggttcccgatctcgccattgaagactttgcgcttgaggggccaagc
ccgtatgaggtcagccgcctgtcgctggcactcgaggcggaagggcatgacatcacgctc
tcgcgtctcgaggtcgattcccgcgacgtgaacgcagatctcgtggcgcaggtcaccttg
aaggacgagtatcccctgagcgccacgctcaatgccgagaccctgattgaccccgtgcgt
catgaaaagctgcgcctgtctctggaaggctcgctggcggatcttgaagcctctctcaag
gccgacggtccacttgccgctgagcttgtggccagcgcggatgtactggacagcgatctg
cccttcgaggcacgcctgagctccgagcggatcacctggccctttgctgccgtcactgat
gcctctgatgacacctccgcggatgcgcagaaaggcgctcagacagcgacccaagccaag
gatggcaagaatacgtctggcaccgctgccgctgcctccttcacgcctgactatagcgtc
gagaatctggcgctggtcgccaagggctcactgtcggggtatacgaccacgctggatgcc
atcatcgaggggcgtgacattccgcgcgccaccttgtcattggcaggcgacggcgatctc
gcgcattaccgctggcagccgctcaagatcgcgctcaagcgtggctccgcgaccacccgt
ggcgagattcactggcaggaaggtatccaggtcgccgccgagctggccctcgacaagctg
catcccgaagacttgctgccggccccgaccgggggcggtcagaaagccgtgcgtggtgag
ctgagcggcaatctcgtggccagcttccaacagccgcagcaaggaccgtgggccgtcgat
gtcagcaagctggatatccacggcaccttgctcgagcgtccgctcacgctgaccggcaag
ctttcaggcaatgccgacatgcagtgggacgtcaatgcgctggagctgcgccagggccag
aaccgtctgagcgccaatggcaagattgccaagaccatcactctggcggccaacatcgat
ttcccggcgctctcgaccctgatgccggatatcgcgggtgagctcaagggcaagatcgat
gcctcgggcacgctcgacaagccccagctggccagcaacttcagcgcacgacgcctgcag
atcggtgagaaccgtatctccgacatggcgctgtcggccggggtcgatgctcgcaagcgg
gggattgatgacccggcactggatatcgccctgaatgccgatgatgtcagagctggcgga
cagcagatcgcgacggtcgcgctgacgctgggaggcttcctgagcgatcacaccctgcag
ttcgataccgagatggccggtgagatgccgctttctcgtctgggactgaccctcaagggg
gggctcgacaaggcgcgtgagcattatcgtggtgcactgtctccgctgacggcgaatacc
gacttcggggacttcaacttcgacacgccggcgagcttcgatgccaatctcgccaagggc
agcgtgctggtgcagccgttctgcctgagtcgcgaacagggcggccagatctgtgtcgcc
gagcccttgagcgcgggcaatgacggtcaggccgtggtgactcttgaggggattccgctg
gacatggcccagagcgccatgccggagagctggaccatcggcggtgccacgggcggcaag
atcacggcaagctggaagcagggtggccaacgctggaatgctgacgcggagctggcgggc
aagttgacgctggccggcgaagacgccgacggcaatgcctggtcactgcccgagaccacc
ctgcaactggcgctggaggccacacccgacaaggccgatctcgatacccagattcgcctc
gacagcgctggcggcatcggtctcaccgtgtcggtcctcgacccggcgggcgcaggtcag
ctggatggctcgcttgccatccgcgacatcgacctctcgccgtatcgtccgctggtggcg
ggcatgactcagctggaaggcaagctggcgggtgatgtcgaggtcggcggcaatctcagc
ctgccgtcgttgaccggcccgatcgcgctgaccggcgtcaaggtccagggcgaaggcctg
ccggtgtcgctgtcggatgcccagttcaccgtcgacttcgatggcaacagtgccgatatc
gatggctatctggtgggcaatgatgcgcgctggggcatcgatggcgaggcggcgtggccg
acgcttgaggactggacggcgtcattgaacctcgacggcgcgaagaatccgctcgaacta
catatcgccgggatcggccgcatgcgcgtcgcgccggatctcgagatcaatgccagtccc
acgcttctcaagctgcggggggacgtcaaggtgccgtggacacgcatcgaagtggaccag
gtgccgccgtctgccgtgtcaccctccagtgacaccatcatcatcgagcgtcccagtgat
gaggacacctccaacccggccgagcttgccgatggcagcgataccgccaaggcgctcaat
gaggccggcatggcgctggatgtgcgtatcggcatccatatcgggccggatgcgcgcctg
gaggcgatggggctcaagactaagctcagaggcgatctcgatgtgcgccagtccaagggc
ggcgtgcaggtcttcggtgaggtcaatctggtcgacggaacctacaagagcttcggacag
gacctgcagatcagcaaggggcaggtcttgctggccggaccgccctcgagcccgcgtctg
aatatcgaggcgatccgtgatcctgacaacaccgaggacgacgtgaccgcaggggtgcgt
gtgaccggacttgcctcgtcacccagcgtcgagatcttctcggacccgtcgatggatgaa
tcctcggcactgagttatcttctgcgcggtgaaggcctggacagcgacaccagcagtgat
agtgcggtcacgtccgccttgatcggcatgtcactggcgcaaagtggccaggtggtcggc
cagatcggggaaaccttcggcgtgcgtgacctgagtctggacagctccggcagcggggat
gacagccaggtggtggtcagcggctatatcgctccggacctgaagctcagctacggcgtc
gggctgttctcgccgatcgcggagttgacactgcgctacaagctgttccgcaatctgtat
gccgaagcggtgtccggcacggcgcaggccgtggatctgctctacagcttctcgctgggt
cgcagcgagctggcgcccagagtcggcaaggacagatga
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