Halomonas sp. SF2003: C8233_02805
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Entry
C8233_02805 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C8233_02805
09124 Replication and repair
03420 Nucleotide excision repair
C8233_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haf03021
]
C8233_02805
03036 Chromosome and associated proteins [BR:
haf03036
]
C8233_02805
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_02805
Enzymes [BR:
haf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
C8233_02805
Transcription machinery [BR:
haf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C8233_02805
Chromosome and associated proteins [BR:
haf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
C8233_02805
DNA repair and recombination proteins [BR:
haf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C8233_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
Prp19
Motif
Other DBs
NCBI-ProteinID:
AVV35344
LinkDB
All DBs
Position
705270..706577
Genome browser
AA seq
435 aa
AA seq
DB search
MGDWLAEPDKAANPAAARQQPARAKATQAPEQLGLIASDASSSAPITKDTGTATTVSGSA
SSTARRRVEPDVEMMEAYFAALTLARLAEGFGDHSLFEVELAATPPARQASLASDSSSSC
SAASAVGAEAEAVGSEAAARPRKARGRSVRQIQPRLRCVSPAPWLAPRLRASHATLLFSA
TLNPPAYHHRLLGLADDAVWLSVDSPFSAAQVQVSRHRLSTRLRDRDASCRPIAELMAGQ
YRQRPGNYLAFFSSFVYLEQVASTLQQLAPEIPQWRQTRAMTEAERTGFIQRFTPEGQGI
GFAVLGGAFGEGIDLPGSRLIGAFIATLGLAGFSPENEALKQRLATWLDNDAQRRSQPEQ
TEGDPHDATRTPCPVIQPLNADDCTYLYPGLTRVVQAAGRVIRSEQDQGVIHLIDDRFMR
PEVARLLPRWWSPTN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactggttggcggagcctgacaaggccgcaaaccctgctgcggccaggcaacag
ccagcgagagccaaagccacacaagcccccgaacagctgggcctgatcgcaagcgatgcc
tcctcttcggcaccgattaccaaggatacaggcactgcaacgacagtctccggctcggcc
tcctccacggccaggcgccgcgtggagcccgatgtcgagatgatggaggcgtattttgcg
gcactgacactggcgcgactcgccgaaggcttcggcgatcactctctgttcgaggtcgaa
ctcgccgccactccccctgcgcggcaggcgtcgcttgccagcgattcaagctcgagttgc
agcgcagcatcggctgtaggggcagaagcagaagcagtaggatcagaagcagcagcccgg
ccacgcaaggcccgcgggcgcagcgtgcgccagatccagccgcgactgcgctgcgtcagc
ccggcgccgtggctggcgccccgcctgcgcgccagtcacgccactctgctgttctcggcc
acactcaatccaccggcctatcaccatcgcctgctaggtctggcggacgatgccgtctgg
ctgagtgtcgattccccgttcagcgcggcccaggtgcaggtcagtcgtcaccggctctcg
acacgcctgcgggatcgcgacgcctcctgtcggccgatcgccgagctgatggcaggccaa
taccggcaacgcccgggcaactatctggcgttcttctcgagcttcgtctatctggagcag
gtcgccagcaccctgcaacagctggcgccggagattccccaatggcgacagacccgcgcc
atgacggaggctgagcgcaccggcttcattcagcgcttcacgcccgagggacaaggcatc
ggcttcgcggtactgggtggcgccttcggcgaagggatcgatctgcccggctcgcgtctg
atcggggccttcatcgccaccctgggactggccggtttcagccccgagaatgaagcgctc
aagcagcgcctggccacgtggctcgacaacgacgcacagcggcgtagccagccggaacag
actgaaggcgacccacacgacgctacgcgcacaccgtgcccggtcatccagccattgaat
gccgatgactgcacctatctgtacccgggactcaccagagtggtgcaggctgccggccga
gtgattcgcagcgagcaggatcagggcgtgatccacttgatcgatgaccgcttcatgcgc
ccggaagtcgcacggttgctgccacgctggtggtcaccgacgaattga
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