Halomonas sp. SF2003: C8233_03060
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Entry
C8233_03060 CDS
T05423
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03030
DNA replication
haf03430
Mismatch repair
haf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C8233_03060
03430 Mismatch repair
C8233_03060
03440 Homologous recombination
C8233_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haf03032
]
C8233_03060
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_03060
Enzymes [BR:
haf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C8233_03060
DNA replication proteins [BR:
haf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C8233_03060
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C8233_03060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AVV32788
LinkDB
All DBs
Position
complement(765717..766523)
Genome browser
AA seq
268 aa
AA seq
DB search
MRQIILDTETTGIDPKEGHRLIEIGAVEMINRRLTGRTYHQYVNPERLIDAEAIGVHGIT
DERVANEPVFAEIADAFWDFIKGAQLVIHNAPFDVGFIDHEFGLINPGRANPLGPVADHC
AILDTLKLAREKHPGQRNNLDALCKRYDIDNGHRVLHGALLDAEILGDVYLAMTGGQTAL
GLDVIEEGDGEEGGIVGVRRLRADRPRLATPGLSALELERHSAWCEEIRGKADECLFDRL
SINALGSIDSASLDGASLDSRGNRGDDA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattattctcgataccgaaacgacaggtatcgatccgaaggaaggccatcgc
ctgatcgagatcggcgcggtggagatgatcaaccgccgcctgaccggacgcacctaccat
cagtacgtcaatcctgagcgcttgatcgatgcagaggcgatcggggtacacggcatcacc
gatgagcgagtcgccaacgagccggtcttcgccgagatcgccgatgccttctgggacttc
atcaagggtgcccagctggtcatccacaatgcgcccttcgatgtgggcttcatcgatcac
gaattcgggctgatcaatcccgggcgtgccaacccgttgggcccggtcgccgatcactgc
gccattctcgataccctgaagctggcccgagagaagcaccccggacagcgcaacaacctg
gatgcgctgtgcaagcgctacgatatcgacaacgggcatcgtgtgctgcacggcgccttg
ctggatgccgagattctcggcgacgtctatctggcgatgaccggtggccagacggcgctg
ggcctggacgtgatagaggaaggcgatggcgaggagggcggtatcgtcggggttcgtcgc
ctgcgtgccgatcgcccacgtctggccacacccgggctttccgcgctggagcttgagcgt
cactcggcctggtgtgaagagattcgtggcaaggccgatgagtgcctgttcgatcgcctc
tcgatcaatgcactgggcagtattgatagtgccagtcttgatggcgccagtctggacagc
cgaggcaaccgcggagacgacgcctga
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