Halomonas sp. SF2003: C8233_03510
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Entry
C8233_03510 CDS
T05423
Name
(GenBank) TRAP transporter substrate-binding protein DctP
KO
K11688
TRAP-type transport system periplasmic protein
Organism
haf
Halomonas sp. SF2003
Pathway
haf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C8233_03510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_03510
Transporters [BR:
haf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C8233_03510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctP
aRib
Caudo_TAP
DUF6616
DUF5312
Motif
Other DBs
NCBI-ProteinID:
AVV32861
LinkDB
All DBs
Position
complement(875716..876744)
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AA seq
342 aa
AA seq
DB search
MSLSKTSLLRKTLTGSTLALSLLAASVQAQTINLSYNGAPDADKNAVHVFASNLKTLVEE
KTDGELELKLYPNSMLGEEQERMEQVISAPNLNIASFAGMAPIVPEVYVSATPFMFDGFD
EARRFFDEGQYWQQVQQLFSERTNGAEILAVVEEGGFLAFTNDKRPITSPDDFEGLRFRA
MDPSQVALYEAFGASGTPIPWTEVYMALRTGVADGQMNPPMYILLGSLQEVQKYLTLANI
QYSDQFLVANGQLLESLSDEERTALLEAVQEANAQARQDNQSQVESRIASLEEQGMQVIR
PSEADLEAFRSKGQPAYLEWLKSQDIAPELIDTAMKDAGLSS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtccaagacatctctgctgcgcaagacgctcaccggttccactctggcgctc
agcctgctggcggccagcgtgcaggcccagaccatcaacctcagctacaacggtgcaccg
gatgccgacaagaatgcggtgcatgtcttcgccagcaatctgaagaccctggtggaagag
aagaccgacggcgagctggaacttaagctctatcccaacagcatgctgggcgaggagcag
gagcgcatggagcaggtgatcagcgccccgaacctgaatatcgcctctttcgcgggcatg
gcccccatcgtgccggaagtctatgtcagcgcgacgccgttcatgttcgacggctttgat
gaggcgcgccgtttcttcgatgaggggcagtactggcagcaggtgcagcagctgttcagc
gagcgcaccaatggcgccgagatactggccgtcgtggaggaagggggctttctggccttc
accaacgacaagcgcccgatcaccagccctgatgattttgaaggcctgcgttttcgcgcg
atggacccaagccaggtagcgctctacgaggccttcggcgcctcgggcacgccgattccg
tggacggaggtctacatggcgctgcgcacgggggtggcggatggtcagatgaacccgccg
atgtacatcctgctgggcagtctgcaggaagtgcagaagtacctgacactggccaacatc
cagtattccgatcagttcctggtcgccaatggtcagctgctcgagagcctgtcggatgag
gagcgcacggcacttctcgaggcggttcaggaagccaatgcccaggcccgtcaggacaac
cagagccaggtcgaatcacgcatcgcctcgctggaagagcagggcatgcaagtgatccgt
cccagtgaggctgatctcgaggcatttcgcagcaagggccagccggcctacctcgaatgg
ctcaagagccaggacatcgcgccagagctgatcgataccgccatgaaggatgctggcctg
tcctcgtga
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