KEGG   Halomonas sp. SF2003: C8233_04385
Entry
C8233_04385       CDS       T05423                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
haf  Halomonas sp. SF2003
Pathway
haf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:haf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C8233_04385 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haf02044]
    C8233_04385 (clpV)
Secretion system [BR:haf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C8233_04385 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 nSTAND3 ATPase_2 Sigma54_activat AAA_7 AAA_14 PilJ TniB Zeta_toxin IstB_IS21 NACHT Clp_N TsaE AAA_30 AAA_24 T2SSE DUF815 SLFN-g3_helicase Hpr_kinase_C CENP-H
Other DBs
NCBI-ProteinID: AVV33019
LinkDB
Position
complement(1081964..1084636)
AA seq 890 aa
MSLKTLFAKLNDVSRGAMEEAAGLCLAKRQYEVDVEHLLIKLLDGDDNDLLRIARHYSLG
LDQLADQLDRSLERLKTGSTATPALSPHITRLIEKAWLIASIDHEVAHIRSGHLLLALLE
DPELARVIRSDMPGLESPFERIDVADLRLHFTSLLAASPEAELSQPSQHAPRAGEPTSGE
GAGAARPGSHKTPALDQYTIDLTASARDGNIDPILGRDDEVRQMIDILTRRRQNNPILTG
EAGVGKTAVVEGLAQKIVAGEVPAPLARVELRTLDLGLLQAGASVKGEFEQRLKDVIEEV
KRSLHPIILFIDEAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKD
AALARRFQVVKVEEPAEPQAIDMLRGLATRMRDHHKVEILDDAIVQAVRLSSRYITGRQL
PDKAVSVLDTACARVALGQQTTPAPLEDARQRLRDLEAEREALAREHERGDDGHAPRLDE
IDTEVLAITAQVTALEADWTRQREAVEAVLKADAALNEINGEANDAARESALEELRAARA
VLEEAGGEAPLVHACVDGNAIGEVVAAWTGIPLGKMQRDEIDTVRRLPALLGERVLGQDH
ALEEIGKRISLSRAKLEDPNKPIGVFMLLGPSGVGKTETALALADTLYGGERNLITINMS
EYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLEVFFQVFD
KGVMDDGEGREIDFRNCVILLTSNVGTDEIMNRCLGVATPPAPEALVEGLRDTLNGVFKP
AFLGRLKVVPYYPVHSDILARIVDLKLSRLAARFTRNHGAHLSFDSSLAHHIAERCTQTD
SGARSIDHLLSGSMMPPLVEWVLERMADQQPVGDIRIALDDAGQFTYEMQ
NT seq 2673 nt   +upstreamnt  +downstreamnt
gtgagtctcaagacgctattcgccaagctcaatgatgtcagccgcggtgccatggaagag
gcggcgggtctgtgccttgccaagcgccagtatgaagtcgatgtcgagcatctgctgatc
aagctgctggatggcgatgacaacgacctgttgcgcatcgcgcgtcactactcgctgggc
ctggatcaactcgccgatcagctggatcgctcgctggagcgcctgaagacgggcagcacc
gcgacgccggcactctcaccgcatatcacgcggctgatcgagaaggcctggttgatcgcc
tccatcgaccatgaggtcgcccatatccgcagcggtcacctgctgctggcactgctggaa
gacccggaactggcgcgcgtgatccgaagcgacatgccgggtctcgagagtcctttcgag
cgcatcgatgtcgcggacctgcgtctgcacttcaccagcctgttggctgccagtcccgaa
gccgaactgtcccagccgtctcagcatgccccgcgcgcgggcgagccgacgtcaggcgag
ggcgctggtgctgcccgcccgggcagtcacaagaccccggcgctggaccagtacaccatc
gacctgaccgccagtgcgcgtgacggcaacatcgacccgatcctggggcgtgatgatgaa
gtgcgccagatgatcgacatcctgacgcgtcggcgtcagaacaacccgatcctcaccggc
gaggcgggggtcggcaagacggcggtggtcgaaggcctggcgcagaagatcgtcgccggc
gaagtgcccgcgccgctggcacgcgtcgagctgcgcaccctggacctcggcctgctgcag
gccggcgccagcgtgaagggcgaattcgaacagcgcctgaaggacgtgatcgaggaagtg
aagcgcagcctgcaccccatcatcctgttcatcgatgaagcccacaccctgatcggcagt
ggcggtcaggcaggccagaacgatgccgccaacctgctcaagccggccttggcgcgtggc
gagctgcgcaccatcgccgcgactacctgggccgagtacaagaagtacttcgagaaggac
gccgccctggcgcgtcgcttccaggtcgtcaaggtcgaggagccggccgagccgcaggcc
atcgacatgctgcgcgggctggcgacgcgcatgcgcgatcaccacaaggtcgagattctc
gatgacgccatcgtgcaggcggtgcgtctctccagccgctacatcaccggccgtcagctg
cccgacaaggcggtcagcgtgctggataccgcctgtgcgcgtgtcgcgctgggccagcag
accacgccagcaccgctggaagatgcccgtcagcgcctgcgtgatctggaggccgagcgg
gaagcgctggcccgggaacacgagcgcggcgatgacggccatgctccgcgtctggatgag
atcgacacggaagtactggccatcactgctcaggtcacggcgctggaagccgactggacg
cgtcagcgtgaggccgtcgaggcggtgctcaaggccgacgccgctctgaacgagatcaat
ggtgaggccaatgacgcggcccgtgaaagcgcactggaagaactgcgcgccgcgcgtgcg
gtgctggaagaggccggtggcgaggcgccgctggtacacgcctgtgtcgatggcaatgcc
atcggcgaagtcgtcgccgcctggaccggcatcccgctgggcaagatgcagcgtgacgag
atcgacaccgtgcgtcgtctgccggcgctgttgggcgagcgcgtactcgggcaggaccac
gcactggaagagatcggcaagcgcatcagcctgtcgcgcgccaagctcgaagacccgaac
aagccgatcggtgtcttcatgctgctcggcccgagtggtgtcggcaagaccgaaaccgcg
ctggccctcgccgacaccctgtatggcggggagcgcaatctgatcaccatcaacatgtcc
gagtaccaggaagcgcacaccgtctcctcgctcaagggctcgccgcccggctatgtcggc
tatggcgagggcggcgtgctgaccgaagccgtgcgtcgcaagccgtacagcgtggtgctg
ctcgatgaagtcgagaaggcgcacccggacgtgctggaagtcttctttcaggtgttcgac
aagggcgtgatggatgacggggaagggcgcgagatcgacttccgcaactgcgtcatcctg
ctgacctccaatgtcggcaccgacgagatcatgaaccgctgcctgggcgtggcgactccg
ccggcgcccgaggcgctggtcgagggcctgcgcgataccctcaatggcgtcttcaagccg
gccttcctcggccgtctcaaggtggtgccgtactacccggtgcacagcgacatcctggcg
cgcatcgtcgacctcaagctgtcgcgtctggccgcgcgcttcacgcgcaatcacggcgcc
cacctgagcttcgactcatcgcttgcgcatcacatcgccgagcgttgcacccagaccgac
agcggcgcacgcagcattgatcatctgctcagcggttcgatgatgccgccgctggtggag
tgggtgctggagcgcatggccgatcagcagccggtgggcgacatccgcatcgcgctggat
gacgccggccagttcacctacgagatgcagtga

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