KEGG   Halomonas sp. SF2003: C8233_04395
Entry
C8233_04395       CDS       T05423                                 
Symbol
vasA
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
haf  Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:haf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haf02044]
    C8233_04395 (vasA)
Secretion system [BR:haf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C8233_04395 (vasA)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AVV33021
LinkDB
Position
complement(1085844..1087679)
AA seq 611 aa
MLDELLPYYEQEISHLRFLGREFAREYPKIAARLQLEGDHCEDPHTERLVESFAFLSARV
HKKLDDDLPEIVEAFLDVLYPHYLRPTPSLSIAQLDPGEQTSLTGRYQVARHTEMFSRPV
EGVACRFRTCYPVDVWPLRVESAGFSLLERSAFNGRDKDSVARLDLAFEALNDQSVGSFG
IDRLRLFLDGEGALMHPMYELLFNNLTRLSVSFDEGGQRREVSLPTDSLKPVGFAPEEGL
IDYPERSFLGYRLLHEYFTFPDKFMFFDVEGLTRLLARASGTRFELHFHFADYALDERLS
RLSQSLGRNHFRLGCTPVINLFERQAEPILLTHTQAEYPVVADVRNPHGAEVVSIDRVTR
VQKTAERDHVRYCPPFFEPQGSAPSRETSYWLSRRVPSARERDAGTELLLRLADRELNAI
EATSDVLSLKLTCSNRDLPQRLSFGHPRGDFTLPREQVVKAIRCLRKPTPSARPPMGKGV
IWRLISHLSLNHLSLVERGREALLEMLSLYNYRDLEATRRQINGIASIHSEPAMTRIGHP
RPAFVRGIGITLELDEQEFIGSGIYVFGMVLDHFFGQYCSLNSFTRLTLRSRQREKDVVT
WPARTGTQPLV
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcttgatgaactgctgccttattacgaacaagaaatctcgcacctgcgctttctgggc
cgggagttcgcacgtgagtaccccaagattgccgcacgactgcaattggaaggcgaccac
tgcgaagacccgcacaccgagcgtctggtcgagtccttcgcgttcctgtcggcacgggtt
cacaagaagctggatgatgatctgccggaaatcgtcgaggccttcctcgatgtgctctac
ccccattacctgcgaccgacgccttcgctgtcgatcgcacagctcgaccccggtgagcag
acctcgctgaccgggcgctatcaggtcgcgcggcataccgagatgttctcgcgtccggtg
gaaggcgtggcctgccgtttccgtacctgctatccggtggatgtgtggccgctgcgcgtg
gaaagcgccggcttctcgctgctggaacgctcggccttcaatggccgcgacaaggacagc
gtcgcgcgactggatctggccttcgaggccctcaatgaccagtcggtgggcagcttcggg
atcgaccgcctgcgcctgttcctggacggcgagggtgccctgatgcacccaatgtacgaa
ctgctgttcaacaacctgactcgcctgagcgtcagcttcgatgaaggcgggcagcgccgc
gaagtctcgctgccgacggactcgctcaagccggtcgggttcgcgcccgaggaggggctg
atcgactaccccgagcgctccttcctcggctatcgcctgctgcacgagtacttcaccttc
cccgacaagttcatgttcttcgatgtcgaagggctgacacgtctgttggcacgcgccagt
ggcacgcgcttcgagctacatttccacttcgcggactatgcgctggacgagcggctgtcg
cggctgtcccagagcctggggcgcaatcatttccgcctcggctgcacgccggtgatcaac
ctgttcgagcgccaggccgagccgatcctgctgacgcatacccaagcggaatatccggtg
gtcgccgatgtgcgcaatccgcacggcgccgaagtggtctcgatcgatcgcgtcacgcgc
gtgcagaagaccgccgagcgcgatcacgtgcgctattgcccgccgtttttcgagccgcag
ggcagtgcaccgtcacgcgagaccagctactggctgtcgcggcgggtgccttccgcccgt
gagcgggatgccggcaccgagcttttgctgcgcctggcggaccgcgagctgaatgccatc
gaagccaccagcgacgtgctgagcctcaagctgacctgcagcaatcgtgatctgccgcag
cgcctgagcttcggccatccgcgtggcgatttcaccctgccgcgtgagcaggtggtcaag
gccatccgctgcctgcgcaagccgacgccctcggcgcggccgccgatgggcaagggcgtc
atctggcgtctgatctcgcacctctcgctcaaccacctgtcactggtggagcgcggccgt
gaggcgctgctggaaatgctctcgctctacaactatcgcgacctcgaagccacgcgtcgt
cagatcaatggcatcgccagcatccacagtgagccggcgatgacgcggatcgggcatccg
cgcccggccttcgtgcgcggaatcggcatcaccctggaactggatgaacaggaattcatc
ggtagcggcatctacgtgttcggcatggtgctggatcacttcttcgggcagtactgctcg
ctcaacagtttcacccggctgacattacgcagccgccagcgcgaaaaggacgtcgtgaca
tggcccgccagaaccggcactcagcccctggtctga

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