KEGG   Halomonas sp. SF2003: C8233_04440
Entry
C8233_04440       CDS       T05423                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
haf  Halomonas sp. SF2003
Pathway
haf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:haf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C8233_04440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haf02044]
    C8233_04440
Secretion system [BR:haf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C8233_04440
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Gp5_trimer_C Sarcoglycan_1
Other DBs
NCBI-ProteinID: AVV33029
LinkDB
Position
complement(1098862..1101468)
AA seq 868 aa
MSDSWVLDALLSSFDVSLSQNERLLTLEMSGADFIPHRLVGEERMSRPFAYTLDCISQNG
DIELKTLMAQPAALSVRQADGSYRKLSGLVESAALLGEDGGVFYYQLTLVPWMAMLKLGR
DSRIFQDLTAVEVIESVFSHHAIAQGEAQGGWRLDLRREYPARSYCVQYRESDFQFVNRL
MEQEGLFYYFEHASDDSDFNGHRLVITDDVATCAPVEPQVIRFHRQDATELEDSITQWSG
RRQQQPTRVSLGTFDYKQPGLEKRSGQDTRSDQGNLSEQEVYDYPGEYYFDDHSRGERLT
VNRLEAHESRAKRFHGAGGTRQLKVGRWFELSQHARHEDGDASEREFLVLGLTVCAENAL
PVSAHLKALPGSLQARMAEARQAHGLESDAQDDYADVGTGQYLIDFESQRLSQPYRPSLD
HPRPNLGGPQTAIVVGPENEEIHTDSLNRVRVQFHWDRSEKGAADASCWLRVAQPNAGAG
WGSVFVPRIGQEVIVDFLEGDVDRPLITGRVYNGDQTPQWHSNGLLSGLKSKTYRGNKYN
ELVFDDATDQERVRLNSEHEKSQLNLGYLIHQQGNTRGSFRGTGFELRSDAYGAIRANSG
LMLSSWGQIAASGEQLDLSPAQQQLASAYQLANTLSDSATSHNAEALAARTQIKQASDDT
QGTYGADDSGSRFDGSSAQSATNGGRGQAARLNAPWLHLTSPAGIASSTPESTHLAQGRS
LSVTSGEDINLASGRSLVGAVVEKFSLFVQRSGIKLFAGKGKVEVQAQSDAMDLTAEKDV
TITSTENDIDINAAKEILLTCGGAYVRLKDGNIELHAPGKIDVKGAQHSFGGPTSLNAAM
TELPEGEDLLCPSKGQSAAANGDGVVES
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgtcagattcatgggtactcgacgccttgctgtcgtcgtttgatgtctcactgagccag
aacgagcgcctgctcacgcttgagatgagcggcgcagacttcatcccgcaccgcctggtg
ggggaagagcgcatgtcgcgtcccttcgcctataccctcgactgcatctcccagaacggt
gatatcgagctcaagacactgatggcgcagccggcggcgctctcggtgcgtcaggccgat
ggcagttaccgcaagctctcggggctggttgagtcggccgcactgctcggtgaggacggt
ggcgtcttctattaccagctgacgctggtgccgtggatggcgatgctcaagctcggccgc
gacagccgtatcttccaggacctcaccgccgtcgaggtcatcgagtcggtgttctcgcat
catgccatcgcgcagggtgaagcccagggcggctggcggctggacctgcgtcgcgagtat
ccggcgcgcagctactgcgtccaatatcgcgagagcgacttccagttcgtcaatcgcctg
atggagcaggaggggctgttctactacttcgaacacgcctctgacgacagcgacttcaat
ggccaccgcctcgtcatcaccgatgatgtcgcgacctgtgcgccggttgagccacaagtc
atccgcttccaccgtcaggatgccaccgaacttgaagactccatcacccaatggagcggc
cgccgtcagcagcagccaacacgagtcagcctcggcaccttcgattacaagcagccgggc
ctcgaaaagcgctcaggccaggacacgcgtagcgatcagggcaacctcagcgagcaggaa
gtctacgactaccccggcgagtactactttgatgatcactcgcgcggcgaacgtctgacc
gtcaatcgcctcgaagcccatgaatcccgcgccaagcgcttccatggcgccgggggcacc
cggcagttgaaggtcggccgctggttcgaactcagccagcacgcccgccatgaagacggc
gacgcgagtgagcgcgaattcctcgtgctgggcctgaccgtctgcgccgagaatgcgctg
ccggtgtcggcacacctcaaagcactaccgggtagcctgcaggcgcgcatggccgaggcg
cgccaggcacatggtcttgagagtgatgcgcaggacgactacgccgatgtcggcaccggc
cagtatctgatcgacttcgagagccagcgcctcagtcagccgtaccgtccgtctctcgat
catccgcggccgaatcttggcggcccgcagaccgcgattgtcgtcggccccgagaacgaa
gagatccacaccgactcgctcaaccgcgtgcgcgtccagttccactgggaccgcagcgag
aagggtgccgccgacgccagttgctggctgcgtgtcgcgcagcccaacgctggcgctggc
tggggcagcgtgttcgtgccacgcattggtcaggaggtcatcgtcgacttcctcgaaggc
gacgtggatcggccgctgatcaccgggcgggtctacaacggcgaccagaccccgcaatgg
cactccaacggcctgctctccggtctcaagagcaagacctaccgcggcaacaagtacaac
gagctggtcttcgatgatgcgaccgatcaggagcgtgtgcgcctgaattcggagcacgag
aaatcccagctcaacctcggctatctgatccaccagcagggcaacacacgcggcagcttc
cgcggtaccggcttcgagctgcgctcggacgcctatggggcgattcgtgccaacagcggc
ctgatgctcagtagctggggccagatcgccgccagtggcgaacagctggatctctctcct
gcgcaacagcagctcgccagcgcctatcagctggccaatacgctcagcgacagcgccacc
agccacaacgccgaggcgctcgcggcgcgtacgcagatcaagcaggccagcgacgatacc
caaggcacctatggcgccgatgacagtggtagtcgctttgacggtagttcagctcagagc
gctaccaatggcgggcgagggcaggcggcgcgcctgaatgcaccctggctgcatctcaca
tcgcccgccggcatcgccagcagtacgccggaatcgacgcacctggcacagggccgctct
ctcagcgtcaccagtggcgaagacatcaacctggccagcgggcgcagtctggtaggcgcc
gtggtcgagaagttctcgctgttcgtgcagcgctctggcatcaagctgtttgccggcaag
ggcaaggtcgaagtgcaggcgcaaagtgatgcgatggacctgacagcggaaaaggacgtc
accatcacctccaccgaaaacgacatcgacatcaacgccgccaaggaaattctgctcacc
tgcggcggcgcctatgtccgcctcaaggacggcaatatcgaactgcatgcgccgggcaag
attgatgtcaaaggcgcgcagcacagcttcggtgggccgacgagtctgaatgccgcgatg
acggaattgccggaaggcgaagacttgctgtgtccgagtaaaggacaaagcgctgccgcc
aatggcgacggtgtggtggagtcctga

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